RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 KNG1P01042 644 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 CSF1P09603 554 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 CD46P15529 392 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 HOXA11P31270 313 aaPredicted RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 SGSHP51688 502 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 PCGF3Q3KNV8 242 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 MORN1Q5T089 497 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 INIPQ9NRY2 104 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 RIMS3Q9UJD0 308 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 LSM5Q9Y4Y9 91 aaKnown RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 AP1M2Q9Y6Q5 423 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 LOC105369274A0A096LPK9 316 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 MPIG6BO95866 241 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 ALDOBP05062 364 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 TRA2BP62995 288 aaKnown RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 HNRNPA1L2Q32P51 320 aaKnown RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 GPR149Q86SP6 731 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 OR4N4Q8N0Y3 316 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 TOMM40LQ969M1 308 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 C5AR2Q9P296 337 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 BOKQ9UMX3 212 aaPredicted RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 IGKV6-21A0A0C4DH24 114 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 ARHGAP19Q14CB8 494 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 SLC35G1Q2M3R5 365 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 GARNL3Q5VVW2 1013 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 RTL6Q6ICC9 239 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 TLDC1Q6P9B6 456 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 S100A7AQ86SG5 101 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 NAGSQ8N159 534 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 PLEK2Q9NYT0 353 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 NFS1Q9Y697 457 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 PRSS38A1L453 326 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 ZXDBP98169 803 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 EEF1A2Q05639 463 aaKnown RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 MALSU1Q96EH3 234 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 SENP5Q96HI0 755 aaPredicted RBP21.78■■□□□ 1.08
NPAS3-201ENST00000346562 RDH14Q9HBH5 336 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 STARD5Q9NSY2 213 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 SPO11Q9Y5K1 396 aa21.78■■□□□ 1.08
NPAS3-201ENST00000346562 MAP4K2Q12851 820 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 PLCXD3Q63HM9 321 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 CNEP1R1Q8N9A8 125 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 ASCC1Q8N9N2 400 aaKnown RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 OR52R1Q8NGF1 315 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 NETO1Q8TDF5 533 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 PFDN5Q99471 154 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 NGBQ9NPG2 151 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 FAIMQ9NVQ4 179 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 FAM230AA0A1W2PPH8 454 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 CD300LBA8K4G0 201 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 TOXO94900 526 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 SELENOWP63302 87 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 MPP7Q5T2T1 576 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 PNCKQ6P2M8 343 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 WDR53Q7Z5U6 358 aaPredicted RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 ISCA2Q86U28 154 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 TRUB1Q8WWH5 349 aaKnown RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 SC5DO75845 299 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 PDZD9Q8IXQ8 264 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 ZNF587Q96SQ5 575 aaPredicted RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 INPP5KQ9BT40 448 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 ERVK13-1Q9NX77 482 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 SLC9B1P1A6NJY1 282 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 NUDT21O43809 227 aaKnown RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 TP53I3Q53FA7 332 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 ANKLE1Q8NAG6 615 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 CHDHQ8NE62 594 aaPredicted RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 CACNG6Q9BXT2 260 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 OR2B2Q9GZK3 357 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 GPN2Q9H9Y4 310 aaPredicted RBP21.77■■□□□ 1.08
NPAS3-201ENST00000346562 SDHAF2Q9NX18 166 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 LTN1O94822 1766 aa21.77■■□□□ 1.08
NPAS3-201ENST00000346562 PIK3C2AO00443 1686 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 ANKRD34BA5PLL1 514 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 A8MXE2 369 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 CD200R1Q8TD46 325 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 ADAMTS16Q8TE57 1224 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 INTS14Q96SY0 518 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 ASB4Q9Y574 426 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 IER3IP1Q9Y5U9 82 aa21.77■■□□□ 1.07
NPAS3-201ENST00000346562 YY2O15391 372 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 PRSS56P0CW18 603 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 CAV2P51636 162 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 IGFN1Q86VF2 1251 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 ST6GALNAC5Q9BVH7 336 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 ADAMTS6Q9UKP5 1117 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 NSG1A0A0A6YYJ2 146 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 FAM171A2A8MVW0 826 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 M0R3H8 397 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 LCKP06239 509 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 CCDC28AQ8IWP9 274 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 OR52A4PA6NMU1 304 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 PPP1R3BQ86XI6 285 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 DTD2Q96FN9 168 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 AMDHD1Q96NU7 426 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 DPCDQ9BVM2 203 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-201ENST00000346562 KLF16Q9BXK1 252 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-201ENST00000346562 SYNPO2LQ9H987 977 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 CBLCQ9ULV8 474 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 XRN1Q8IZH2 1706 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms