RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RBM24Q9BX46 236 aaKnown RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 DPEP3Q9H4B8 488 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 CACNG4Q9UBN1 327 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 TRIP12Q14669 1992 aaPredicted RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 OAS1P00973 400 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 F2RL1P55085 397 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 CXADRP78310 365 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 MEF2AQ02078 507 aaPredicted RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 PIN1Q13526 163 aaPredicted RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 ACOT13Q9NPJ3 140 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 DLX3O60479 287 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CLDN7O95471 211 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 CLDN19Q8N6F1 224 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 IL31RAQ8NI17 732 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 TBC1D20Q96BZ9 403 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 NIPAL2Q9H841 368 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 ABCC3O15438 1527 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 PIKFYVEQ9Y2I7 2098 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 MANBAO00462 879 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CXCL11O14625 94 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 GPR137BO60478 399 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 TOX4O94842 621 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 AHSGP02765 367 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 C4BPAP04003 597 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 METTL15P1P0C7V9 234 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 ARL6IP1Q15041 203 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 BPIFCQ8NFQ6 507 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 STEAP2Q8NFT2 490 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 ABHD11Q8NFV4 315 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 OR9A1PQ8NGU1 263 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 IRGQQ8WZA9 623 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CHFRQ96EP1 664 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 BTBD17A6NE02 478 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 J3KR12 359 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 RDH16O75452 317 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CSF1P09603 554 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 NANPQ8TBE9 248 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 GHRLQ9UBU3 117 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 ENSAO43768 121 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 KLRC4O43908 158 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 PTPN2P17706 415 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 OGDHQ02218 1023 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 MELKQ14680 651 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 GPR19Q15760 415 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 B3GLCTQ6Y288 498 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CMTM2Q8TAZ6 248 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 BRIX1Q8TDN6 353 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 ZNF582Q96NG8 517 aaPredicted RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 FBXL2Q9UKC9 423 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 POP7O75817 140 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 NTSR2O95665 410 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 HBE1P02100 147 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 MMP3P08254 477 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 KCNE1P15382 129 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 NME2P22392 152 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 CTXN1P60606 82 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 RAB33AQ14088 237 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 GPR33Q49SQ1 333 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 RGMBQ6NW40 437 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 OR10K1Q8NGX5 313 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 ADIPOR1Q96A54 375 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 NSUN3Q9H649 340 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
USP47-202ENST00000339865 EHFQ9NZC4 300 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 SLC23A2Q9UGH3 650 aa12.17□□□□□ -0.46
USP47-202ENST00000339865 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 NXPH3O95157 252 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 CASP3P42574 277 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 BAXQ07812 192 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 ADAM5Q6NVV9 412 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PRSS48Q7RTY5 328 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 TAC4Q86UU9 113 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 DNAJC5GQ8N7S2 189 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 KIAA1958Q8N8K9 716 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 KATNB1Q9BVA0 655 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 CEP152O94986 1710 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 CRYM-AS1A6NIL9 109 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PRAF2O60831 178 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 FOLR1P15328 257 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 RPS26P62854 115 aaKnown RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 MBTPS1Q14703 1052 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PCLAFQ15004 111 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 SLC9A3R2Q15599 337 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 OR8J1Q8NGP2 316 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 SLC25A18Q9H1K4 315 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 HRASLSQ9HDD0 168 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PRTFDC1Q9NRG1 225 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 H7BY64 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms