RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 VRK2Q86Y07 508 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 GATAD2AQ86YP4 633 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 POC5Q8NA72 575 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 ZBTB8BQ8NAP8 495 aaPredicted RBP13.21□□□□□ -0.3
VRK3-201ENST00000316763 KCT2Q8NC54 265 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 OR4K14Q8NGD5 310 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 OR52I1Q8NGK6 324 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 TMEM163Q8TC26 289 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 MS4A4EQ96PG1 132 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 FCRL4Q96PJ5 515 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 SERINC2Q96SA4 455 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 SLC38A3Q99624 504 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 PARD6AQ9NPB6 346 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 SEMA4GQ9NTN9 838 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 NDUFB11Q9NX14 153 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 SNX4O95219 450 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 PVRP15151 417 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 ALOX12P18054 663 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 EPHA8P29322 1005 aaPredicted RBP13.2□□□□□ -0.3
VRK3-201ENST00000316763 SOX3P41225 446 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 EPHA4P54764 986 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 DEFA1P59665 94 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 DEFA3P59666 94 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 C3orf38Q5JPI3 329 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 ARMC6Q6NXE6 501 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
VRK3-201ENST00000316763 BCDIN3DQ7Z5W3 292 aaKnown RBP13.2□□□□□ -0.3
VRK3-201ENST00000316763 OR52P1PQ8NH57 321 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 SAP25Q8TEE9 199 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 QRSL1Q9H0R6 528 aaKnown RBP13.2□□□□□ -0.3
VRK3-201ENST00000316763 SEMA6CQ9H3T2 930 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 MTHFD2LQ9H903 347 aaPredicted RBP13.2□□□□□ -0.3
VRK3-201ENST00000316763 PRDM9Q9NQV7 894 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 MRPS18AQ9NVS2 196 aaKnown RBP13.2□□□□□ -0.3
VRK3-201ENST00000316763 NTMQ9P121 344 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 SCN3AQ9NY46 2000 aa13.2□□□□□ -0.3
VRK3-201ENST00000316763 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 A0A1W2PS29 197 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CPSF4LA6NMK7 179 aaKnown RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 YKT6O15498 198 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PRODHO43272 600 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 NUDT21O43809 227 aaKnown RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 B3GALT2O43825 422 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 LRP3O75074 770 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PTTG1O95997 202 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PROS1P07225 676 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 ACP2P11117 423 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 RORCP51449 518 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 RGS8P57771 180 aaPredicted RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 COPZ1P61923 177 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 EFNB1P98172 346 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 NHLH1Q02575 133 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 RAB40BQ12829 278 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 LTB4RQ15722 352 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CSRP2Q16527 193 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 DECR1Q16698 335 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 STEAP3Q658P3 488 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 HEPHL1Q6MZM0 1159 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PLEKHM3Q6ZWE6 761 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PRICKLE2Q7Z3G6 844 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 MRGPREQ86SM8 312 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PEX5LQ8IYB4 626 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CADM3Q8N126 398 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 TOR1AIP2Q8NFQ8 470 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 DIO2Q92813 273 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 GIMAP5Q96F15 307 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 SLC35A4Q96G79 324 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 C10orf90Q96M02 699 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 GPA33Q99795 319 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 ZFYVE21Q9BQ24 234 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 KCNS3Q9BQ31 491 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 POLE4Q9NR33 117 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 RXFP3Q9NSD7 469 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 PCDHGB6Q9Y5F9 930 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 RNF215Q9Y6U7 377 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 HYKKA2RU49 373 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 ZNF670-ZNF695F2Z2N8 137 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 IMPDH2P12268 514 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 STAT5AP42229 794 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CRYBB2P43320 205 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 AVPR1BP47901 424 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CBX3Q13185 183 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 LARS2Q15031 903 aaKnown RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CCDC190Q86UF4 302 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 KIF18BQ86Y91 864 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 SLC35F3Q8IY50 421 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 CAMKVQ8NCB2 501 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 ACOT11Q8WXI4 607 aaPredicted RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 OSTF1Q92882 214 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 COL26A1Q96A83 441 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms