RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GTF2IRD2Q86UP8 949 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 P3H2Q8IVL5 708 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 ACOT11Q8WXI4 607 aaPredicted RBP20.61■□□□□ 0.89
SMAD1-201ENST00000302085 OR8D2Q9GZM6 311 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 VN1R1Q9GZP7 353 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 ARMC7Q9H6L4 198 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 VCX3AQ9NNX9 186 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 C11orf16Q9NQ32 467 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 CTSFQ9UBX1 484 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 RSL24D1Q9UHA3 163 aaKnown RBP20.61■□□□□ 0.89
SMAD1-201ENST00000302085 OR10H1Q9Y4A9 318 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 PCDHGA10Q9Y5H3 936 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 LYPD3O95274 346 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 IGKV3-11P04433 115 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 SYPP08247 313 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 OMPP47874 163 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 NSDHLQ15738 373 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 ZNF528Q3MIS6 628 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 C12orf73Q69YU5 71 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 PRR23CQ6ZRP0 262 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 KIF18BQ86Y91 864 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 CLVS1Q8IUQ0 354 aaPredicted RBP20.6■□□□□ 0.89
SMAD1-201ENST00000302085 OR13F1Q8NGS4 319 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 ZNF721Q8TF20 911 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 TMEM255BQ8WV15 326 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 PRSS27Q9BQR3 290 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 G6PC3Q9BUM1 346 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 LHPPQ9H008 270 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 MKL2Q9ULH7 1088 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 CLCA3PQ9Y6N3 262 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 NUP210LQ5VU65 1888 aa20.6■□□□□ 0.89
SMAD1-201ENST00000302085 TRAPPC13A5PLN9 417 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 GSTM3P21266 225 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 TTKP33981 857 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 IFNGR2P38484 337 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 EMX1Q04741 257 aaPredicted RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 ELAVL1Q15717 326 aaKnown RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 PWWP2BQ6NUJ5 590 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 LSRQ86X29 649 aaPredicted RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 ZNF614Q8N883 585 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 TOR1AIP2Q8NFQ8 470 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 PIGXQ8TBF5 258 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 SLC2A12Q8TD20 617 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 IPCEF1Q8WWN9 437 aaPredicted RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 ARSGQ96EG1 525 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 SLC7A5P2Q9GIP4 190 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 POLR2J2Q9GZM3 115 aaKnown RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 PSORS1C1Q9UIG5 152 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 PCDHGB1Q9Y5G3 927 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 FMO6PO60774 539 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 SEC14L2O76054 403 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 ATP12AP54707 1039 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 PTCHD4Q6ZW05 846 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 MBOAT2Q6ZWT7 520 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 RRM2BQ7LG56 351 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 SIGLEC11Q96RL6 698 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 LMF1Q96S06 567 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 NUDT9Q9BW91 350 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 AMBNQ9NP70 447 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 SIDT1Q9NXL6 827 aaKnown RBP20.59■□□□□ 0.89
SMAD1-201ENST00000302085 RARRES3Q9UL19 164 aa20.59■□□□□ 0.89
SMAD1-201ENST00000302085 RGS10O43665 173 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 MT-ND2P03891 347 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 ITIH1P19827 911 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 PPICP45877 212 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 MAP2K4P45985 399 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 AHSA2Q719I0 299 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 GRAMD2AQ8IUY3 354 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 PLPP5Q8NEB5 264 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 C7orf57Q8NEG2 295 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 OR4C3Q8NH37 302 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 GGHQ92820 318 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 MUL1Q969V5 352 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 FAM46AQ96IP4 442 aaKnown RBP20.58■□□□□ 0.89
SMAD1-201ENST00000302085 SLC46A1Q96NT5 459 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 CCNB1IP1Q9NPC3 277 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 DNAJB12Q9NXW2 375 aaKnown RBP20.58■□□□□ 0.89
SMAD1-201ENST00000302085 CNIH4Q9P003 139 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 TESQ9UGI8 421 aaKnown RBP20.58■□□□□ 0.89
SMAD1-201ENST00000302085 COMMD3-BMI1R4GMX3 469 aa20.58■□□□□ 0.89
SMAD1-201ENST00000302085 DYRK3O43781 588 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 PIP5K1CO60331 668 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 MRPS14O60783 128 aaKnown RBP20.57■□□□□ 0.88
SMAD1-201ENST00000302085 SLC5A2P31639 672 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 RORAP35398 523 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 NUDT6P53370 316 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 FOXL2P58012 376 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 TSPAN31Q12999 210 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMAD1-201ENST00000302085 GPR107Q5VW38 600 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 WDR88Q6ZMY6 472 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 SLITRK4Q8IW52 837 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 NRMQ8IXM6 262 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 IQCF1Q8N6M8 205 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 FAR1Q8WVX9 515 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 GFM1Q96RP9 751 aaKnown RBP20.57■□□□□ 0.88
SMAD1-201ENST00000302085 TGIF2Q9GZN2 237 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 EVA1AQ9H8M9 152 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 FKBP14Q9NWM8 211 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms