RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CABIN1Q9Y6J0 2220 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 A0A0G2JMP0 313 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 CPMP14384 443 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ANXA11P50995 505 aaKnown RBP20.43■□□□□ 0.86
TPM4-201ENST00000300933 UBE2IP63279 158 aaKnown RBP20.43■□□□□ 0.86
TPM4-201ENST00000300933 GINS1Q14691 196 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 PAQR6Q6TCH4 344 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 CSNK1A1LQ8N752 337 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 TOR4AQ9NXH8 423 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 TRAPPC4Q9Y296 219 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ASXL3Q9C0F0 2248 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ARRDC5A6NEK1 342 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 CCDC182A6NF36 153 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 OR6C70A6NIJ9 312 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 FAM25AB3EWG3 89 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 FAM25CB3EWG5 89 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 FAM25GB3EWG6 89 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 RDH16O75452 317 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 CT62P0C5K7 136 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 TLX1P31314 330 aaPredicted RBP20.43■□□□□ 0.86
TPM4-201ENST00000300933 ALDH6A1Q02252 535 aaKnown RBP20.43■□□□□ 0.86
TPM4-201ENST00000300933 FRRS1Q6ZNA5 592 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ABHD13Q7L211 337 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ZNF367Q7RTV3 350 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 KIF18BQ86Y91 864 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ELMOD2Q8IZ81 293 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 AVL9Q8NBF6 648 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 OR9A4Q8NGU2 314 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 SETD6Q8TBK2 473 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 CRELD1Q96HD1 420 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 FAM46AQ96IP4 442 aaKnown RBP20.43■□□□□ 0.86
TPM4-201ENST00000300933 PRRC1Q96M27 445 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 CCDC3Q9BQI4 270 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 PINK1Q9BXM7 581 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 COL4A2P08572 1712 aa20.43■□□□□ 0.86
TPM4-201ENST00000300933 ACP2P11117 423 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 TIMM50Q3ZCQ8 353 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 FIGNL1Q6PIW4 674 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 PAMR1Q6UXH9 720 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 DGAT2L6Q6ZPD8 337 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 GRPEL2Q8TAA5 225 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 TRIM63Q969Q1 353 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 PHF11Q9UIL8 331 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 A0A0X1KG70 313 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 WWP2O00308 870 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 CH25HO95992 272 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 GKN3PP0CG01 181 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 ERV3-1Q14264 604 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 MAPK14Q16539 360 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 ZDHHC1Q8WTX9 485 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 WSB2Q9NYS7 404 aaPredicted RBP20.42■□□□□ 0.86
TPM4-201ENST00000300933 WDR45Q9Y484 360 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 LRP4O75096 1905 aa20.42■□□□□ 0.86
TPM4-201ENST00000300933 THY1P04216 161 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 RGS8P57771 180 aaPredicted RBP20.41■□□□□ 0.86
TPM4-201ENST00000300933 GNA13Q14344 377 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 FAM92BQ6ZTR7 304 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 MOAP1Q96BY2 351 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 MED30Q96HR3 178 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 MS4A4EQ96PG1 132 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 LMAN1LQ9HAT1 526 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 POT1Q9NUX5 634 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 SYNDIG1LA6NDD5 238 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 CCNYL3P0C7X3 344 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 PRG2P13727 222 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 SMIM11AP58511 58 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 ENTPD8Q5MY95 495 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 FAM131AQ6UXB0 335 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 ZNF730Q6ZMV8 503 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 PRR23CQ6ZRP0 262 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 SLC34A3Q8N130 599 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 KLHDC7BQ96G42 594 aa20.41■□□□□ 0.86
TPM4-201ENST00000300933 A0A075B6Q4 140 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 A0A0J9YY10 115 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SMIM30A4D0T7 59 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 URADA6NGE7 173 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 PEX12O00623 359 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SSTR4P31391 388 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 GIPRP48546 466 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 ARFIP1P53367 373 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 PUS10Q3MIT2 529 aaKnown RBP20.4■□□□□ 0.86
TPM4-201ENST00000300933 METTL27Q8N6F8 245 aaPredicted RBP20.4■□□□□ 0.86
TPM4-201ENST00000300933 RNF31Q96EP0 1072 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 TRMT61AQ96FX7 289 aaKnown RBP20.4■□□□□ 0.86
TPM4-201ENST00000300933 LRRC61Q9BV99 259 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SRRQ9GZT4 340 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 CACNA1IQ9P0X4 2223 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 A0A0B4J293 547 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SLC9B1P1A6NJY1 282 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 FAM170BA6NMN3 283 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 PIP5K1CO60331 668 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 GPR4P46093 362 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 WDR45BQ5MNZ6 344 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 PLAG1Q6DJT9 500 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 TYW3Q6IPR3 259 aaKnown RBP20.4■□□□□ 0.86
TPM4-201ENST00000300933 OR2L13Q8N349 312 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 CAMKK1Q8N5S9 505 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 C11orf54Q9H0W9 315 aaPredicted RBP20.4■□□□□ 0.86
TPM4-201ENST00000300933 ENOPH1Q9UHY7 261 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SPAG17Q6Q759 2223 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms