RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MARCH3Q86UD3 253 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 CHDHQ8NE62 594 aaPredicted RBP11.59□□□□□ -0.55
VPREB3-201ENST00000248948 NEURL3Q96EH8 262 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 C1GALT1C1Q96EU7 318 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 WDYHV1Q96HA8 205 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 MAGEB18Q96M61 343 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 OR52B2Q96RD2 323 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 HOXD1Q9GZZ0 328 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 SLCO1B3Q9NPD5 702 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 TCF7L2Q9NQB0 619 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 CAMK2AQ9UQM7 478 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 ADGRG4Q8IZF6 3080 aa11.58□□□□□ -0.55
VPREB3-201ENST00000248948 INTS1Q8N201 2190 aaKnown RBP11.58□□□□□ -0.56
VPREB3-201ENST00000248948 A0A087WZY1 265 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 C7orf72A4D263 438 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 C17orf51A8MQB3 221 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 UBDO15205 165 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 SLC22A3O75751 556 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 EPPINO95925 133 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF708P17019 499 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 IL12AP29459 219 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 TIMP3P35625 211 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 MAGEA8P43361 318 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 NME5P56597 212 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 B3GALT5-AS1P59052 145 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 STX1BP61266 288 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 RPS26P62854 115 aaKnown RBP11.58□□□□□ -0.56
VPREB3-201ENST00000248948 CDSNQ15517 529 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 BCL2A1Q16548 175 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 GLYR1Q49A26 553 aaPredicted RBP11.58□□□□□ -0.56
VPREB3-201ENST00000248948 FLYWCH1Q4VC44 716 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 RAET1LQ5VY80 246 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 NSUN5P2Q63ZY6 315 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 HEPHL1Q6MZM0 1159 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 APOOLQ6UXV4 268 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 C6orf120Q7Z4R8 191 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 GALNT10Q86SR1 603 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 MIER2Q8N344 545 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 OR5D16Q8NGK9 328 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 OR4C3Q8NH37 302 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 ZPLD1Q8TCW7 415 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 CKAP2Q8WWK9 683 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 PANX1Q96RD7 426 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 SIKE1Q9BRV8 207 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 SLC35A5Q9BS91 424 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF350Q9GZX5 532 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 DSN1Q9H410 356 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 POLE3Q9NRF9 147 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 EXD2Q9NVH0 621 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
VPREB3-201ENST00000248948 MED12LQ86YW9 2145 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 A0A0G2JNJ9 132 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MBD3L4A6NDZ8 208 aaPredicted RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MBD3L3A6NE82 208 aaPredicted RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MBD3L5A6NJ08 208 aaPredicted RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 HSPB2A8KAH6 182 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 H0Y3Z8 333 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 H3BNH8 94 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 HNRNPRO43390 633 aaKnown RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ZIC3O60481 467 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 HK1P19367 917 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MATN1P21941 496 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 COL8A1P27658 744 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 CHI3L1P36222 383 aaPredicted RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ZFP36L2P47974 494 aaKnown RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 LHX2P50458 406 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ANXA11P50995 505 aaKnown RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ATP12AP54707 1039 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 SUMO3P55854 103 aaPredicted RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 CLDN18P56856 261 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 HSPB2Q16082 182 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 SLC25A35Q3KQZ1 300 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 HIST2H2BCQ6DN03 193 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 SEM1Q6ZVN7 128 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 LILRB4Q8NHJ6 448 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MBD3L2Q8NHZ7 208 aaPredicted RBP11.57□□□□□ -0.56
VPREB3-201ENST00000248948 DUSP19Q8WTR2 217 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ZBTB8AQ96BR9 441 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MARK4Q96L34 752 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ZFP3Q96NJ6 502 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 OR52E6Q96RD3 313 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 UCN2Q96RP3 112 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 CCDC28BQ9BUN5 200 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 OR51I1Q9H343 314 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 TMEM45AQ9NWC5 275 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 FBXO34Q9NWN3 711 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ALKBH4Q9NXW9 302 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 MED11Q9P086 117 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 Q9UFV3 132 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 ITPR2Q14571 2701 aa11.57□□□□□ -0.56
VPREB3-201ENST00000248948 PKDREJQ9NTG1 2253 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 CCDC154A6NI56 674 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 FAM90A27PA6NNH2 459 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 C9JVG2 144 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 HCRTR2O43614 444 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms