RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SLC7A7Q9UM01 511 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ZFR2Q9UPR6 939 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 SIRT4Q9Y6E7 314 aaPredicted RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 A0A0G2JMP0 313 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 A0A0X1KG70 313 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ERVH48-1M5A8F1 160 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 GTPBP1O00178 669 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 ARHGEF9O43307 516 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 AKR7A2O43488 359 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 NDUFB5O43674 189 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 SLC43A1O75387 559 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 RGS9O75916 674 aaPredicted RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 NDUFV2P19404 249 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 CFL1P23528 166 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 HTR2BP41595 481 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 AGFG1P52594 562 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 CLDN2P57739 230 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 RRAS2P62070 204 aaPredicted RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 DBPQ10586 325 aaPredicted RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 CCDC58Q4VC31 144 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 PLBD1Q6P4A8 553 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 VITQ6UXI7 678 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 OR4M2Q8NGB6 313 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 OR52E1Q8NGJ3 308 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ADAMTS15Q8TE58 950 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 DEDD2Q8WXF8 326 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ZNF681Q96N22 645 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 WDR26Q9H7D7 661 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 MED20Q9H944 212 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 CDH10Q9Y6N8 788 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ZNF780BQ9Y6R6 833 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 PLOD3O60568 738 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 CHRNB1P11230 501 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 GCGRP47871 477 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 SNRPD2P62316 118 aaKnown RBP16.1■□□□□ 0.17
USB1-201ENST00000219281 GPLD1P80108 840 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 TNK1Q13470 666 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 LRRC32Q14392 662 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 BTBD16Q32M84 506 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 SMARCD3Q6STE5 483 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 PLCZ1Q86YW0 608 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 SLC16A11Q8NCK7 471 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 TEX101Q9BY14 249 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 PLA2G2FQ9BZM2 168 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 NIPAL2Q9H841 368 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 TRPV4Q9HBA0 871 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 NLGN3Q9NZ94 848 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 ZNF443Q9Y2A4 671 aaPredicted RBP16.1■□□□□ 0.17
USB1-201ENST00000219281 MUC22E2RYF6 1773 aaPredicted RBP16.1■□□□□ 0.17
USB1-201ENST00000219281 C12orf71A8MTZ7 269 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 INMT-MINDY4F8WBC2 141 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 J3QRE1 110 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 OR5F1O95221 314 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 HMGN1P05114 100 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 DRD3P35462 400 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 STXBP1P61764 594 aaKnown RBP16.1■□□□□ 0.17
USB1-201ENST00000219281 SHHQ15465 462 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 FAM111BQ6SJ93 734 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 LYPD8Q6UX82 237 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 IL20RBQ6UXL0 311 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 FRRS1Q6ZNA5 592 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 GANCQ8TET4 914 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 CDS1Q92903 461 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 UBQLN3Q9H347 655 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 SPHK1Q9NYA1 384 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 GDE1Q9NZC3 331 aa16.1■□□□□ 0.17
USB1-201ENST00000219281 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 SCAMP1O15126 338 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 LANCL1O43813 399 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 FUT1P19526 365 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 PAICSP22234 425 aaKnown RBP16.09■□□□□ 0.17
USB1-201ENST00000219281 EVI2BP34910 448 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 GJA4P35212 333 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 RNF144AP50876 292 aaPredicted RBP16.09■□□□□ 0.17
USB1-201ENST00000219281 BTN3A2P78410 334 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 PUS10Q3MIT2 529 aaKnown RBP16.09■□□□□ 0.17
USB1-201ENST00000219281 ASB18Q6ZVZ8 466 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 TMEM99Q8N816 258 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 OR2L3Q8NG85 312 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 COL26A1Q96A83 441 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 ALG8Q9BVK2 526 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 IRF2BPLQ9H1B7 796 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 BABAM2Q9NXR7 383 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 MOSPD1Q9UJG1 213 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 MYO9BQ13459 2157 aa16.09■□□□□ 0.17
USB1-201ENST00000219281 A0A1B0GVC2 190 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 A6NIN4 97 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 MID1O15344 667 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 PAK4O96013 591 aaPredicted RBP16.08■□□□□ 0.17
USB1-201ENST00000219281 ZGLP1P0C6A0 271 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 PEBP1P30086 187 aaKnown RBP16.08■□□□□ 0.17
USB1-201ENST00000219281 MTNR1BP49286 362 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 CAMK2BQ13554 666 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 GPR176Q14439 515 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 AGERQ15109 404 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 PDGFRLQ15198 375 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 IRF4Q15306 451 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 ACBD7Q8N6N7 88 aa16.08■□□□□ 0.17
USB1-201ENST00000219281 SLC37A3Q8NCC5 494 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms