RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 RNF113BQ8IZP6 322 aaKnown RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 DRAXINQ8NBI3 349 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ANKRD9Q96BM1 317 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CTHRC1Q96CG8 243 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 RBM18Q96H35 190 aaKnown RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CEP19Q96LK0 163 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NUAK2Q9H093 628 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 RNF167Q9H6Y7 350 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 UBE2ZQ9H832 354 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 UCK1Q9HA47 277 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM27Q9HBJ8 222 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 IL20Q9NYY1 176 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 H2AFY2Q9P0M6 372 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 HCN3Q9P1Z3 774 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CRNNQ9UBG3 495 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM5Q9Y2B1 443 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM129A0AVI4 362 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CCDC85CA6NKD9 419 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 DSCR3O14972 297 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 SURF4O15260 269 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PRAMEF2O60811 474 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CBX7O95931 251 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CH25HO95992 272 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 GKN3PP0CG01 181 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 BMP7P18075 431 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 POU3F3P20264 500 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 SOX18P35713 384 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF45Q02386 682 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MGAT2Q10469 447 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MAPK14Q16539 360 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PRTGQ2VWP7 1150 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 SPANXN2Q5MJ10 180 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 HSDL2Q6YN16 418 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF595Q8IYB9 648 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ARL14Q8N4G2 192 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 OR6C4Q8NGE1 309 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 SNRNP27Q8WVK2 155 aaKnown RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM239Q8WW34 195 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 RIT1Q92963 219 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PEX11GQ96HA9 241 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 DGAT2Q96PD7 388 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CD180Q99467 661 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 GAS2L1Q99501 681 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MAP3K3Q99759 626 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF559Q9BR84 538 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ORAI3Q9BRQ5 295 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CDADC1Q9BWV3 514 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MROQ9BYG7 248 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 NXF2Q9GZY0 626 aaKnown RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 FOLH1BQ9HBA9 442 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 FGF20Q9NP95 211 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PRTFDC1Q9NRG1 225 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MRPS18AQ9NVS2 196 aaKnown RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 SLCO1B1Q9Y6L6 691 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 GXYLT2A0PJZ3 443 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 UNC119BA6NIH7 251 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 KLF4O43474 513 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 HCRTR1O43613 425 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 GPX5O75715 221 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CDC123O75794 336 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 KCNK2O95069 426 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 NSA2O95478 260 aaKnown RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 NTN1O95631 604 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 THY1P04216 161 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 HBQ1P09105 142 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 IFI30P13284 250 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PTNP21246 168 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 HTR2AP28223 471 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ATP6V1E1P36543 226 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PSMD7P51665 324 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 LIMK1P53667 647 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 EFNB1P98172 346 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PRKCDQ05655 676 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 RUNX1T1Q06455 604 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 FAM53BQ14153 422 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 GARNL3Q5VVW2 1013 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 LIPKQ5VXJ0 399 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 NXNL2Q5VZ03 156 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF613Q6PF04 617 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PAQR6Q6TCH4 344 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 LAPTM4BQ86VI4 370 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 GID4Q8IVV7 300 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 DEFB119Q8N690 84 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 POGLUT1Q8NBL1 392 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 OR4Q3Q8NH05 313 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 UFD1Q92890 307 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 LMF2Q9BU23 707 aaKnown RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 CNPPD1Q9BV87 410 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 ASPNQ9BXN1 380 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MIR1-1HGQ9H1L0 117 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PCED1AQ9H1Q7 454 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 Q9N2J8 555 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 C2orf42Q9NWW7 574 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 PLCL2Q9UPR0 1127 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 MED31Q9Y3C7 131 aa7.67□□□□□ -1.18
VAMP3-201ENST00000054666 SPIN1Q9Y657 262 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM131Q92545 1883 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ISPDA4D126 451 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 TLCD2A6NGC4 264 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 METTL12A8MUP2 240 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms