RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
CHD2-211ENST00000627460 CCDC191Q8NCU4 936 aa10.7□□□□□ -0.7
CHD2-211ENST00000627460 BACH2Q9BYV9 841 aa10.7□□□□□ -0.7
CHD2-211ENST00000627460 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
CHD2-211ENST00000627460 LRRFIP2Q9Y608 721 aaKnown RBP10.7□□□□□ -0.7
CHD2-211ENST00000627460 HSP90B1P14625 803 aaKnown RBP10.69□□□□□ -0.7
CHD2-211ENST00000627460 GCKRQ14397 625 aa10.69□□□□□ -0.7
CHD2-211ENST00000627460 ZNF772Q68DY9 489 aaPredicted RBP10.69□□□□□ -0.7
CHD2-211ENST00000627460 SIRT2Q8IXJ6 389 aa10.69□□□□□ -0.7
CHD2-211ENST00000627460 SSH3Q8TE77 659 aa10.69□□□□□ -0.7
CHD2-211ENST00000627460 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
CHD2-211ENST00000627460 PALLDQ8WX93 1383 aa10.68□□□□□ -0.7
CHD2-211ENST00000627460 ARFGEF2Q9Y6D5 1785 aa10.68□□□□□ -0.7
CHD2-211ENST00000627460 ERVV-1B6SEH8 477 aa10.68□□□□□ -0.7
CHD2-211ENST00000627460 CYP19A1P11511 503 aaPredicted RBP10.68□□□□□ -0.7
CHD2-211ENST00000627460 TRIM28Q13263 835 aaKnown RBP10.68□□□□□ -0.7
CHD2-211ENST00000627460 DNAJC10Q8IXB1 793 aa10.68□□□□□ -0.7
CHD2-211ENST00000627460 MYD88Q99836 296 aa10.68□□□□□ -0.7
CHD2-211ENST00000627460 LRRCC1Q9C099 1032 aa10.68□□□□□ -0.7
CHD2-211ENST00000627460 CWC25Q9NXE8 425 aaPredicted RBP10.68□□□□□ -0.7
CHD2-211ENST00000627460 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
CHD2-211ENST00000627460 A0A087WZG4 1122 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 NBPF26B4DH59 902 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 SRGAP3O43295 1099 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 A1BGP04217 495 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 ANP32AP39687 249 aaKnown RBP10.67□□□□□ -0.7
CHD2-211ENST00000627460 SIK1P57059 783 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 BMP2KLQ5H9B9 411 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 NBPF14Q5TI25 921 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 NBPF10Q6P3W6 841 aaKnown RBP10.67□□□□□ -0.7
CHD2-211ENST00000627460 NBPF15Q8N660 670 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 LNPKQ9C0E8 428 aa10.67□□□□□ -0.7
CHD2-211ENST00000627460 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 NBPF7P0C2Y1 421 aaPredicted RBP10.66□□□□□ -0.7
CHD2-211ENST00000627460 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 CWF19L2Q2TBE0 894 aaKnown RBP10.66□□□□□ -0.7
CHD2-211ENST00000627460 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 PPP1R42Q7Z4L9 355 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
CHD2-211ENST00000627460 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 NHSQ6T4R5 1651 aa10.66□□□□□ -0.7
CHD2-211ENST00000627460 AOX1Q06278 1338 aa10.65□□□□□ -0.7
CHD2-211ENST00000627460 NUP188Q5SRE5 1749 aa10.65□□□□□ -0.7
CHD2-211ENST00000627460 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
CHD2-211ENST00000627460 ACSBG1Q96GR2 724 aa10.65□□□□□ -0.7
CHD2-211ENST00000627460 GPATCH3Q96I76 525 aa10.65□□□□□ -0.7
CHD2-211ENST00000627460 ZNF652Q9Y2D9 606 aa10.65□□□□□ -0.7
CHD2-211ENST00000627460 NOP58Q9Y2X3 529 aaKnown RBP10.65□□□□□ -0.7
CHD2-211ENST00000627460 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.71
CHD2-211ENST00000627460 TJP1Q07157 1748 aa10.64□□□□□ -0.71
CHD2-211ENST00000627460 KAT6BQ8WYB5 2073 aa10.64□□□□□ -0.71
CHD2-211ENST00000627460 SURF6O75683 361 aaKnown RBP10.64□□□□□ -0.71
CHD2-211ENST00000627460 OS9Q13438 667 aaPredicted RBP10.64□□□□□ -0.71
CHD2-211ENST00000627460 RC3H1Q5TC82 1133 aaKnown RBP10.64□□□□□ -0.71
CHD2-211ENST00000627460 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
CHD2-211ENST00000627460 AK7Q96M32 723 aa10.64□□□□□ -0.71
CHD2-211ENST00000627460 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
CHD2-211ENST00000627460 RREB1Q92766 1687 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 CNTNAP4Q9C0A0 1308 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 H7C1W4 665 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 CRKLP46109 303 aaKnown RBP10.63□□□□□ -0.71
CHD2-211ENST00000627460 RBM6P78332 1123 aaKnown RBP10.63□□□□□ -0.71
CHD2-211ENST00000627460 G3BP1Q13283 466 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHD2-211ENST00000627460 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
CHD2-211ENST00000627460 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 PARP10Q53GL7 1025 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
CHD2-211ENST00000627460 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 CLASRPQ8N2M8 674 aaKnown RBP10.63□□□□□ -0.71
CHD2-211ENST00000627460 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 ISCA1Q9BUE6 129 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 ZBTB3Q9H5J0 574 aa10.63□□□□□ -0.71
CHD2-211ENST00000627460 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
CHD2-211ENST00000627460 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
CHD2-211ENST00000627460 EIF5P55010 431 aaKnown RBP10.62□□□□□ -0.71
CHD2-211ENST00000627460 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 TTLL7Q6ZT98 887 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 UBE3BQ7Z3V4 1068 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 SUCLG2Q96I99 432 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 TMEM106CQ9BVX2 250 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 BICC1Q9H694 974 aaKnown RBP10.62□□□□□ -0.71
CHD2-211ENST00000627460 ZBTB1Q9Y2K1 713 aa10.62□□□□□ -0.71
CHD2-211ENST00000627460 CDHR2Q9BYE9 1310 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 ERC2O15083 957 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 PLEKHM2Q8IWE5 1019 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 ZBTB38Q8NAP3 1195 aaPredicted RBP10.61□□□□□ -0.71
CHD2-211ENST00000627460 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 ARXQ96QS3 562 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 PLA2G12BQ9BX93 195 aa10.61□□□□□ -0.71
CHD2-211ENST00000627460 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms