RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 BCL11BQ9C0K0 894 aaPredicted RBP24.66■■□□□ 1.54
PNKP-214ENST00000600573 RREB1Q92766 1687 aa24.66■■□□□ 1.54
PNKP-214ENST00000600573 TUBGCP6Q96RT7 1819 aa24.66■■□□□ 1.54
PNKP-214ENST00000600573 PDE1AP54750 535 aa24.65■■□□□ 1.54
PNKP-214ENST00000600573 CLASRPQ8N2M8 674 aaKnown RBP24.65■■□□□ 1.54
PNKP-214ENST00000600573 TBC1D32Q96NH3 1257 aa24.65■■□□□ 1.54
PNKP-214ENST00000600573 PLA2G12BQ9BX93 195 aa24.65■■□□□ 1.54
PNKP-214ENST00000600573 SALL3Q9BXA9 1300 aa24.65■■□□□ 1.54
PNKP-214ENST00000600573 RBM6P78332 1123 aaKnown RBP24.64■■□□□ 1.54
PNKP-214ENST00000600573 MX1P20591 662 aa24.64■■□□□ 1.53
PNKP-214ENST00000600573 FOXO4P98177 505 aa24.64■■□□□ 1.53
PNKP-214ENST00000600573 EPHA10Q5JZY3 1008 aa24.64■■□□□ 1.53
PNKP-214ENST00000600573 CDHR2Q9BYE9 1310 aa24.64■■□□□ 1.53
PNKP-214ENST00000600573 HLFQ16534 295 aa24.63■■□□□ 1.53
PNKP-214ENST00000600573 NLRP10Q86W26 655 aa24.63■■□□□ 1.53
PNKP-214ENST00000600573 KRT27Q7Z3Y8 459 aa24.62■■□□□ 1.53
PNKP-214ENST00000600573 ZNF34Q8IZ26 560 aa24.62■■□□□ 1.53
PNKP-214ENST00000600573 TBC1D2BQ9UPU7 963 aa24.62■■□□□ 1.53
PNKP-214ENST00000600573 ZNF652Q9Y2D9 606 aa24.62■■□□□ 1.53
PNKP-214ENST00000600573 CDC45O75419 566 aa24.61■■□□□ 1.53
PNKP-214ENST00000600573 MFAP1P55081 439 aaKnown RBP24.61■■□□□ 1.53
PNKP-214ENST00000600573 PARP10Q53GL7 1025 aa24.61■■□□□ 1.53
PNKP-214ENST00000600573 LMBR1LQ6UX01 489 aa24.61■■□□□ 1.53
PNKP-214ENST00000600573 CLEC4GQ6UXB4 293 aa24.61■■□□□ 1.53
PNKP-214ENST00000600573 AK7Q96M32 723 aa24.61■■□□□ 1.53
PNKP-214ENST00000600573 HSP90B1P14625 803 aaKnown RBP24.61■■□□□ 1.53
PNKP-214ENST00000600573 GSPT1P15170 499 aaKnown RBP24.61■■□□□ 1.53
PNKP-214ENST00000600573 RFX5P48382 616 aaPredicted RBP24.61■■□□□ 1.53
PNKP-214ENST00000600573 OTUD7AQ8TE49 926 aaPredicted RBP24.61■■□□□ 1.53
PNKP-214ENST00000600573 LINC00116Q8NCU8 138 aa24.6■■□□□ 1.53
PNKP-214ENST00000600573 FBXO3Q9UK99 471 aa24.6■■□□□ 1.53
PNKP-214ENST00000600573 TTC41PQ6P2S7 1318 aa24.59■■□□□ 1.53
PNKP-214ENST00000600573 CASC1Q6TDU7 716 aa24.59■■□□□ 1.53
PNKP-214ENST00000600573 GPATCH3Q96I76 525 aa24.59■■□□□ 1.53
PNKP-214ENST00000600573 IL1RAPL2Q9NP60 686 aa24.59■■□□□ 1.53
PNKP-214ENST00000600573 CCNL1Q9UK58 526 aaPredicted RBP24.59■■□□□ 1.53
PNKP-214ENST00000600573 USP42Q9H9J4 1324 aaKnown RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 CAMTA2O94983 1202 aa24.58■■□□□ 1.53
PNKP-214ENST00000600573 PTPN12Q05209 780 aaKnown RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 JARID2Q92833 1246 aaPredicted RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 DAXXQ9UER7 740 aaPredicted RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 PA2G4Q9UQ80 394 aaKnown RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 COL5A3P25940 1745 aaPredicted RBP24.58■■□□□ 1.53
PNKP-214ENST00000600573 BTAF1O14981 1849 aa24.57■■□□□ 1.52
PNKP-214ENST00000600573 RPS6KA4O75676 772 aa24.57■■□□□ 1.52
PNKP-214ENST00000600573 TBC1D9Q6ZT07 1266 aa24.57■■□□□ 1.52
PNKP-214ENST00000600573 ERC2O15083 957 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 CSF1RP07333 972 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 IFIT2P09913 472 aaKnown RBP24.56■■□□□ 1.52
PNKP-214ENST00000600573 FAM182BQ5T319 152 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 PTF1AQ7RTS3 328 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 ANP32EQ9BTT0 268 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 C22orf23Q9BZE7 217 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 BCL11AQ9H165 835 aa24.56■■□□□ 1.52
PNKP-214ENST00000600573 SASH1O94885 1247 aa24.55■■□□□ 1.52
PNKP-214ENST00000600573 TRMT112Q9UI30 125 aaKnown RBP24.55■■□□□ 1.52
PNKP-214ENST00000600573 SDSP20132 328 aa24.54■■□□□ 1.52
PNKP-214ENST00000600573 GPTP24298 496 aa24.54■■□□□ 1.52
PNKP-214ENST00000600573 CCDC57Q2TAC2 916 aa24.54■■□□□ 1.52
PNKP-214ENST00000600573 FAM89AQ96GI7 184 aa24.54■■□□□ 1.52
PNKP-214ENST00000600573 CIAO1O76071 339 aa24.53■■□□□ 1.52
PNKP-214ENST00000600573 SLC27A3Q5K4L6 730 aa24.53■■□□□ 1.52
PNKP-214ENST00000600573 CHMP3Q9Y3E7 222 aa24.53■■□□□ 1.52
PNKP-214ENST00000600573 AK9Q5TCS8 1911 aa24.53■■□□□ 1.52
PNKP-214ENST00000600573 ANKRD36CQ5JPF3 1778 aa24.53■■□□□ 1.52
PNKP-214ENST00000600573 GLRX3O76003 335 aaKnown RBP24.53■■□□□ 1.52
PNKP-214ENST00000600573 IL15P40933 162 aaPredicted RBP24.53■■□□□ 1.52
PNKP-214ENST00000600573 NUTM1Q86Y26 1132 aa24.53■■□□□ 1.52
PNKP-214ENST00000600573 UTP14AQ9BVJ6 771 aaKnown RBP24.53■■□□□ 1.52
PNKP-214ENST00000600573 SBF2Q86WG5 1849 aa24.52■■□□□ 1.52
PNKP-214ENST00000600573 PDE8AO60658 829 aa24.52■■□□□ 1.52
PNKP-214ENST00000600573 BECN1Q14457 450 aa24.52■■□□□ 1.52
PNKP-214ENST00000600573 RTL5Q5HYW3 569 aaPredicted RBP24.52■■□□□ 1.52
PNKP-214ENST00000600573 GPR108Q9NPR9 543 aa24.52■■□□□ 1.52
PNKP-214ENST00000600573 ECHDC1Q9NTX5 307 aa24.52■■□□□ 1.52
PNKP-214ENST00000600573 RTCBQ9Y3I0 505 aaKnown RBP24.52■■□□□ 1.52
PNKP-214ENST00000600573 IRS4O14654 1257 aaPredicted RBP24.51■■□□□ 1.51
PNKP-214ENST00000600573 ILDR2Q71H61 639 aa24.51■■□□□ 1.51
PNKP-214ENST00000600573 SIL1Q9H173 461 aa24.51■■□□□ 1.51
PNKP-214ENST00000600573 NUP98P52948 1817 aa24.51■■□□□ 1.51
PNKP-214ENST00000600573 SH3TC1Q8TE82 1336 aa24.51■■□□□ 1.51
PNKP-214ENST00000600573 MYH14Q7Z406 1995 aaKnown RBP24.51■■□□□ 1.51
PNKP-214ENST00000600573 AACSQ86V21 672 aa24.5■■□□□ 1.51
PNKP-214ENST00000600573 NARFQ9UHQ1 456 aa24.5■■□□□ 1.51
PNKP-214ENST00000600573 LY75O60449 1722 aa24.5■■□□□ 1.51
PNKP-214ENST00000600573 RXRBP28702 533 aa24.5■■□□□ 1.51
PNKP-214ENST00000600573 IFIT5Q13325 482 aaKnown RBP24.5■■□□□ 1.51
PNKP-214ENST00000600573 UBN2Q6ZU65 1347 aa24.49■■□□□ 1.51
PNKP-214ENST00000600573 EYA2O00167 538 aa24.49■■□□□ 1.51
PNKP-214ENST00000600573 RBM25P49756 843 aaKnown RBP24.49■■□□□ 1.51
PNKP-214ENST00000600573 KLHDC4Q8TBB5 520 aa24.49■■□□□ 1.51
PNKP-214ENST00000600573 NIP7Q9Y221 180 aaKnown RBP eCLIP24.49■■□□□ 1.51
PNKP-214ENST00000600573 ADRA2BP18089 450 aa24.48■■□□□ 1.51
PNKP-214ENST00000600573 CTSWP56202 376 aa24.48■■□□□ 1.51
PNKP-214ENST00000600573 SUSD4Q5VX71 490 aa24.48■■□□□ 1.51
PNKP-214ENST00000600573 POTEAQ6S8J7 498 aa24.48■■□□□ 1.51
PNKP-214ENST00000600573 PI4K2BQ8TCG2 481 aa24.48■■□□□ 1.51
PNKP-214ENST00000600573 TTLL11Q8NHH1 800 aa24.47■■□□□ 1.51
PNKP-214ENST00000600573 EAF2Q96CJ1 260 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms