RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 NHSQ6T4R5 1651 aa13.03□□□□□ -0.32
CHMP1B-202ENST00000588284 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
CHMP1B-202ENST00000588284 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
CHMP1B-202ENST00000588284 PNMA6EA0A0J9YXQ4 647 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 SUCLG2Q96I99 432 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 TJP1Q07157 1748 aa13.02□□□□□ -0.33
CHMP1B-202ENST00000588284 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 NOP58Q9Y2X3 529 aaKnown RBP13.01□□□□□ -0.33
CHMP1B-202ENST00000588284 TRIM37O94972 964 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 CASP7P55210 303 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 HLFQ16534 295 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 PARP10Q53GL7 1025 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
CHMP1B-202ENST00000588284 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
CHMP1B-202ENST00000588284 BICC1Q9H694 974 aaKnown RBP13□□□□□ -0.33
CHMP1B-202ENST00000588284 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
CHMP1B-202ENST00000588284 PLSCR1O15162 318 aa12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 BTAF1O14981 1849 aa12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
CHMP1B-202ENST00000588284 SBF2Q86WG5 1849 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 PDE4AP27815 886 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 KIF1BPQ96EK5 621 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 AK7Q96M32 723 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 PLA2G12BQ9BX93 195 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
CHMP1B-202ENST00000588284 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 ZPR1O75312 459 aa12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-202ENST00000588284 RREB1Q92766 1687 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 APBB1O00213 710 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 GNPATO15228 680 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 GPTP24298 496 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 KCNQ4P56696 695 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 FOXO4P98177 505 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 BACH2Q9BYV9 841 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
CHMP1B-202ENST00000588284 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.34
CHMP1B-202ENST00000588284 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 APBA3O96018 575 aa12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
CHMP1B-202ENST00000588284 COL5A3P25940 1745 aaPredicted RBP12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 CSF1RP07333 972 aa12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 RFC4P35249 363 aa12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP1B-202ENST00000588284 LY75O60449 1722 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 PDE8AO60658 829 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 CCDC57Q2TAC2 916 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 BMP2KLQ5H9B9 411 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 C16orf71Q8IYS4 520 aaPredicted RBP12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 LRRC4BQ9NT99 713 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
CHMP1B-202ENST00000588284 SSFA2P28290 1259 aa12.92□□□□□ -0.34
CHMP1B-202ENST00000588284 RFX5P48382 616 aaPredicted RBP12.92□□□□□ -0.34
CHMP1B-202ENST00000588284 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
CHMP1B-202ENST00000588284 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
CHMP1B-202ENST00000588284 NYXQ9GZU5 481 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms