RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 SUCLG2Q96I99 432 aa10.95□□□□□ -0.66
LSM3P5-201ENST00000566307 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
LSM3P5-201ENST00000566307 MAP3K15Q6ZN16 1313 aa10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 TCIRG1Q13488 830 aa10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 DDRGK1Q96HY6 314 aa10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 COPRSQ9NQ92 184 aa10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 EXOC6BQ9Y2D4 811 aa10.94□□□□□ -0.66
LSM3P5-201ENST00000566307 ANKRD36CQ5JPF3 1778 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 PALLDQ8WX93 1383 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 COL5A3P25940 1745 aaPredicted RBP10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 CDC45O75419 566 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 PDE1AP54750 535 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 FAM98CQ17RN3 349 aaKnown RBP10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 GIGYF2Q6Y7W6 1299 aaKnown RBP10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 KIF6Q6ZMV9 814 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 PLA2G12BQ9BX93 195 aa10.93□□□□□ -0.66
LSM3P5-201ENST00000566307 AFF2P51816 1311 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 CDHR2Q9BYE9 1310 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 A0A087WZG4 1122 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 LOC102724428A0A0B4J2F2 783 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 GSPT1P15170 499 aaKnown RBP10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 MX1P20591 662 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 EIF5P55010 431 aaKnown RBP10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 SIK1P57059 783 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
LSM3P5-201ENST00000566307 KAT6BQ8WYB5 2073 aa10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 TTC41PQ6P2S7 1318 aa10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 PCCAP05165 728 aaPredicted RBP10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 RFX5P48382 616 aaPredicted RBP10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 ZBTB1Q9Y2K1 713 aa10.91□□□□□ -0.66
LSM3P5-201ENST00000566307 CNTNAP4Q9C0A0 1308 aa10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 EPB41L2O43491 1005 aaKnown RBP10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 SMARCA5O60264 1052 aaPredicted RBP10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 INTS5Q6P9B9 1019 aaKnown RBP10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 UBE3BQ7Z3V4 1068 aa10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 OTUD7AQ8TE49 926 aaPredicted RBP10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 NUP98P52948 1817 aa10.9□□□□□ -0.66
LSM3P5-201ENST00000566307 SBF2Q86WG5 1849 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 SEC24BO95487 1268 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 CRKLP46109 303 aaKnown RBP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 RBM25P49756 843 aaKnown RBP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 FOXO4P98177 505 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 G3BP1Q13283 466 aaKnown RBP eCLIP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 EPHA10Q5JZY3 1008 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 TBC1D9Q6ZT07 1266 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 CLASRPQ8N2M8 674 aaKnown RBP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 ZBTB38Q8NAP3 1195 aaPredicted RBP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 AK7Q96M32 723 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 LY75O60449 1722 aa10.89□□□□□ -0.67
LSM3P5-201ENST00000566307 BTAF1O14981 1849 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 MYH14Q7Z406 1995 aaKnown RBP10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 SDSP20132 328 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 PTPN12Q05209 780 aaKnown RBP10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 ITPK1Q13572 414 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 CASC1Q6TDU7 716 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 ZNF34Q8IZ26 560 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 GPR108Q9NPR9 543 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
LSM3P5-201ENST00000566307 ERC2O15083 957 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 CIAO1O76071 339 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 SASH1O94885 1247 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 CSF1RP07333 972 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 PARP10Q53GL7 1025 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 CLEC4GQ6UXB4 293 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 NLRP10Q86W26 655 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 TICAM2Q86XR7 235 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 DZIP3Q86Y13 1208 aaKnown RBP10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 C22orf23Q9BZE7 217 aa10.87□□□□□ -0.67
LSM3P5-201ENST00000566307 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
LSM3P5-201ENST00000566307 APBB1O00213 710 aa10.86□□□□□ -0.67
LSM3P5-201ENST00000566307 KCNQ2O43526 872 aa10.86□□□□□ -0.67
LSM3P5-201ENST00000566307 HSP90B1P14625 803 aaKnown RBP10.86□□□□□ -0.67
LSM3P5-201ENST00000566307 OS9Q13438 667 aaPredicted RBP10.86□□□□□ -0.67
LSM3P5-201ENST00000566307 PI4K2BQ8TCG2 481 aa10.86□□□□□ -0.67
LSM3P5-201ENST00000566307 GPATCH3Q96I76 525 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms