RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 ARXQ96QS3 562 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 PNPLA7Q6ZV29 1317 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 ZPR1O75312 459 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 IGHDP01880 384 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-203ENST00000565704 TM4SF1P30408 202 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 MTX1Q13505 466 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-203ENST00000565704 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-203ENST00000565704 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-203ENST00000565704 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
GDPD3-203ENST00000565704 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.34
GDPD3-203ENST00000565704 PHF14O94880 888 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 UBTFL1P0CB47 393 aaPredicted RBP17.14■□□□□ 0.33
GDPD3-203ENST00000565704 ATP8B2P98198 1209 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 SUCLG2Q96I99 432 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
GDPD3-203ENST00000565704 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
GDPD3-203ENST00000565704 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
GDPD3-203ENST00000565704 GPTP24298 496 aa17.13■□□□□ 0.33
GDPD3-203ENST00000565704 RABL6Q3YEC7 729 aaPredicted RBP17.13■□□□□ 0.33
GDPD3-203ENST00000565704 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
GDPD3-203ENST00000565704 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
GDPD3-203ENST00000565704 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
GDPD3-203ENST00000565704 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
GDPD3-203ENST00000565704 NTSR2O95665 410 aa17.12■□□□□ 0.33
GDPD3-203ENST00000565704 FOXO4P98177 505 aa17.12■□□□□ 0.33
GDPD3-203ENST00000565704 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
GDPD3-203ENST00000565704 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
GDPD3-203ENST00000565704 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
GDPD3-203ENST00000565704 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
GDPD3-203ENST00000565704 POLA2Q14181 598 aa17.11■□□□□ 0.33
GDPD3-203ENST00000565704 NFIXQ14938 502 aa17.11■□□□□ 0.33
GDPD3-203ENST00000565704 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
GDPD3-203ENST00000565704 SSH3Q8TE77 659 aa17.11■□□□□ 0.33
GDPD3-203ENST00000565704 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
GDPD3-203ENST00000565704 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
GDPD3-203ENST00000565704 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
GDPD3-203ENST00000565704 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
GDPD3-203ENST00000565704 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
GDPD3-203ENST00000565704 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
GDPD3-203ENST00000565704 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
GDPD3-203ENST00000565704 CSF1RP07333 972 aa17.09■□□□□ 0.33
GDPD3-203ENST00000565704 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
GDPD3-203ENST00000565704 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
GDPD3-203ENST00000565704 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
GDPD3-203ENST00000565704 BICC1Q9H694 974 aaKnown RBP17.09■□□□□ 0.33
GDPD3-203ENST00000565704 SMC5Q8IY18 1101 aa17.08■□□□□ 0.32
GDPD3-203ENST00000565704 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.32
GDPD3-203ENST00000565704 DCTPP1Q9H773 170 aa17.08■□□□□ 0.32
GDPD3-203ENST00000565704 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
GDPD3-203ENST00000565704 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
GDPD3-203ENST00000565704 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
GDPD3-203ENST00000565704 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
GDPD3-203ENST00000565704 DDR1Q08345 913 aa17.06■□□□□ 0.32
GDPD3-203ENST00000565704 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
GDPD3-203ENST00000565704 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
GDPD3-203ENST00000565704 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
GDPD3-203ENST00000565704 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
GDPD3-203ENST00000565704 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
GDPD3-203ENST00000565704 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
GDPD3-203ENST00000565704 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
GDPD3-203ENST00000565704 CARMIL3Q8ND23 1372 aa17.04■□□□□ 0.32
GDPD3-203ENST00000565704 PDE8AO60658 829 aa17.04■□□□□ 0.32
GDPD3-203ENST00000565704 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
GDPD3-203ENST00000565704 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
GDPD3-203ENST00000565704 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
GDPD3-203ENST00000565704 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
GDPD3-203ENST00000565704 SOCS7O14512 581 aa17.03■□□□□ 0.32
GDPD3-203ENST00000565704 SRGAP3O43295 1099 aa17.03■□□□□ 0.32
GDPD3-203ENST00000565704 HMMRO75330 724 aa17.03■□□□□ 0.32
GDPD3-203ENST00000565704 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
GDPD3-203ENST00000565704 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
GDPD3-203ENST00000565704 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
GDPD3-203ENST00000565704 SERPINB2P05120 415 aa17.02■□□□□ 0.32
GDPD3-203ENST00000565704 HCLS1P14317 486 aaPredicted RBP17.02■□□□□ 0.32
GDPD3-203ENST00000565704 CTSWP56202 376 aa17.02■□□□□ 0.32
GDPD3-203ENST00000565704 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
GDPD3-203ENST00000565704 NBPF5PQ86XG9 351 aaPredicted RBP17.02■□□□□ 0.32
GDPD3-203ENST00000565704 GCC1Q96CN9 775 aa17.02■□□□□ 0.32
GDPD3-203ENST00000565704 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
GDPD3-203ENST00000565704 RTL9Q8NET4 1388 aa17.02■□□□□ 0.31
GDPD3-203ENST00000565704 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
GDPD3-203ENST00000565704 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
GDPD3-203ENST00000565704 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
GDPD3-203ENST00000565704 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
GDPD3-203ENST00000565704 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
GDPD3-203ENST00000565704 PRR5LQ6MZQ0 368 aa17.01■□□□□ 0.31
GDPD3-203ENST00000565704 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
GDPD3-203ENST00000565704 FAM177BA6PVY3 158 aa17■□□□□ 0.31
GDPD3-203ENST00000565704 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
GDPD3-203ENST00000565704 LAMB2P55268 1798 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms