RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
IFT43-209ENST00000555305 SASH1O94885 1247 aa17.7■□□□□ 0.42
IFT43-209ENST00000555305 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
IFT43-209ENST00000555305 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
IFT43-209ENST00000555305 SLC4A3P48751 1232 aa17.7■□□□□ 0.42
IFT43-209ENST00000555305 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
IFT43-209ENST00000555305 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
IFT43-209ENST00000555305 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
IFT43-209ENST00000555305 HIP1O00291 1037 aa17.69■□□□□ 0.42
IFT43-209ENST00000555305 FOXO4P98177 505 aa17.69■□□□□ 0.42
IFT43-209ENST00000555305 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
IFT43-209ENST00000555305 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
IFT43-209ENST00000555305 CDHR2Q9BYE9 1310 aa17.69■□□□□ 0.42
IFT43-209ENST00000555305 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
IFT43-209ENST00000555305 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
IFT43-209ENST00000555305 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
IFT43-209ENST00000555305 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
IFT43-209ENST00000555305 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
IFT43-209ENST00000555305 CIAO1O76071 339 aa17.68■□□□□ 0.42
IFT43-209ENST00000555305 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
IFT43-209ENST00000555305 KIF2CQ99661 725 aa17.68■□□□□ 0.42
IFT43-209ENST00000555305 ANAPC15P60006 121 aa17.67■□□□□ 0.42
IFT43-209ENST00000555305 TICAM2Q86XR7 235 aa17.67■□□□□ 0.42
IFT43-209ENST00000555305 GPR108Q9NPR9 543 aa17.67■□□□□ 0.42
IFT43-209ENST00000555305 CCDC87Q9NVE4 849 aa17.67■□□□□ 0.42
IFT43-209ENST00000555305 TJP1Q07157 1748 aa17.67■□□□□ 0.42
IFT43-209ENST00000555305 LOC102724428A0A0B4J2F2 783 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 ATP6V1AP38606 617 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 IL15P40933 162 aaPredicted RBP17.66■□□□□ 0.42
IFT43-209ENST00000555305 SIK1P57059 783 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
IFT43-209ENST00000555305 SIL1Q9H173 461 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 USP21Q9UK80 565 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 ZNF831Q5JPB2 1677 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 PALLDQ8WX93 1383 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
IFT43-209ENST00000555305 FAM98CQ17RN3 349 aaKnown RBP17.66■□□□□ 0.42
IFT43-209ENST00000555305 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
IFT43-209ENST00000555305 AK7Q96M32 723 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 ZBTB1Q9Y2K1 713 aa17.66■□□□□ 0.42
IFT43-209ENST00000555305 RGL2O15211 777 aa17.65■□□□□ 0.42
IFT43-209ENST00000555305 AEBP2Q6ZN18 517 aaPredicted RBP17.65■□□□□ 0.42
IFT43-209ENST00000555305 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
IFT43-209ENST00000555305 CHMP3Q9Y3E7 222 aa17.65■□□□□ 0.42
IFT43-209ENST00000555305 ST18O60284 1047 aa17.64■□□□□ 0.41
IFT43-209ENST00000555305 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.41
IFT43-209ENST00000555305 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
IFT43-209ENST00000555305 TNNI3KQ59H18 835 aa17.64■□□□□ 0.41
IFT43-209ENST00000555305 ARXQ96QS3 562 aa17.64■□□□□ 0.41
IFT43-209ENST00000555305 FPGT-TNNI3KV9GXZ4 949 aa17.64■□□□□ 0.41
IFT43-209ENST00000555305 KIAA1211Q6ZU35 1233 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 ACSBG1Q96GR2 724 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 ATP5JP18859 108 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 NLRP10Q86W26 655 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 ANO2Q9NQ90 1003 aa17.63■□□□□ 0.41
IFT43-209ENST00000555305 RREB1Q92766 1687 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 A0A0G2JS52 829 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 K7ELQ4 463 aaPredicted RBP17.62■□□□□ 0.41
IFT43-209ENST00000555305 EYA2O00167 538 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 SGSM2O43147 1006 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 CRKLP46109 303 aaKnown RBP17.62■□□□□ 0.41
IFT43-209ENST00000555305 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
IFT43-209ENST00000555305 KLHDC4Q8TBB5 520 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
IFT43-209ENST00000555305 RAD50Q92878 1312 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 RFX7Q2KHR2 1363 aa17.62■□□□□ 0.41
IFT43-209ENST00000555305 CSF1RP07333 972 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 MCM2P49736 904 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 TFCP2Q12800 502 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
IFT43-209ENST00000555305 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
IFT43-209ENST00000555305 CCDC8Q9H0W5 538 aaPredicted RBP17.61■□□□□ 0.41
IFT43-209ENST00000555305 AKAP2Q9Y2D5 859 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 ZNF652Q9Y2D9 606 aa17.61■□□□□ 0.41
IFT43-209ENST00000555305 ZNF34Q8IZ26 560 aa17.6■□□□□ 0.41
IFT43-209ENST00000555305 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
IFT43-209ENST00000555305 THSD7AQ9UPZ6 1657 aa17.6■□□□□ 0.41
IFT43-209ENST00000555305 ANKRD36CQ5JPF3 1778 aa17.59■□□□□ 0.41
IFT43-209ENST00000555305 HLFQ16534 295 aa17.59■□□□□ 0.41
IFT43-209ENST00000555305 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
IFT43-209ENST00000555305 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.41
IFT43-209ENST00000555305 ATG9AQ7Z3C6 839 aa17.58■□□□□ 0.41
IFT43-209ENST00000555305 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.41
IFT43-209ENST00000555305 AK9Q5TCS8 1911 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 PDE8AO60658 829 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 NBR1Q14596 966 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 CLEC4GQ6UXB4 293 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.4
IFT43-209ENST00000555305 CEP126Q9P2H0 1117 aa17.58■□□□□ 0.4
IFT43-209ENST00000555305 CNTNAP4Q9C0A0 1308 aa17.57■□□□□ 0.4
IFT43-209ENST00000555305 MAP4K4O95819 1239 aaPredicted RBP17.57■□□□□ 0.4
IFT43-209ENST00000555305 HSPA4P34932 840 aa17.57■□□□□ 0.4
IFT43-209ENST00000555305 CTSWP56202 376 aa17.57■□□□□ 0.4
IFT43-209ENST00000555305 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms