RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 GNAI3P08754 354 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 PKP1Q13835 747 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 FOXD4L5Q5VV16 416 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-211ENST00000555082 FOXD4L4Q8WXT5 416 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-211ENST00000555082 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 BMP2KLQ5H9B9 411 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 LINS1Q8NG48 757 aa12.09□□□□□ -0.47
PRKCH-211ENST00000555082 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
PRKCH-211ENST00000555082 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-211ENST00000555082 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
PRKCH-211ENST00000555082 HLFQ16534 295 aa12.08□□□□□ -0.48
PRKCH-211ENST00000555082 PLBD2Q8NHP8 589 aa12.08□□□□□ -0.48
PRKCH-211ENST00000555082 CRKLP46109 303 aaKnown RBP12.07□□□□□ -0.48
PRKCH-211ENST00000555082 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 RPAP2Q8IXW5 612 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-211ENST00000555082 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-211ENST00000555082 SUCLG2Q96I99 432 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 PPP1R9BQ96SB3 815 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 GCKRQ14397 625 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
PRKCH-211ENST00000555082 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-211ENST00000555082 RBSNQ9H1K0 784 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 GRM8O00222 908 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 OFD1O75665 1012 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
PRKCH-211ENST00000555082 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 CACNA1FO60840 1977 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 GPTP24298 496 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 ATP8B2P98198 1209 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
PRKCH-211ENST00000555082 PDCL3Q9H2J4 239 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
PRKCH-211ENST00000555082 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
PRKCH-211ENST00000555082 A0A087WZG4 1122 aa12.05□□□□□ -0.48
PRKCH-211ENST00000555082 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
PRKCH-211ENST00000555082 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
PRKCH-211ENST00000555082 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-211ENST00000555082 TRIM37O94972 964 aa12.05□□□□□ -0.48
PRKCH-211ENST00000555082 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
PRKCH-211ENST00000555082 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
PRKCH-211ENST00000555082 SYNE4Q8N205 404 aa12.05□□□□□ -0.48
PRKCH-211ENST00000555082 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
PRKCH-211ENST00000555082 PA2G4Q9UQ80 394 aaKnown RBP12.05□□□□□ -0.48
PRKCH-211ENST00000555082 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 PTMSP20962 102 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
PRKCH-211ENST00000555082 SMARCC1Q92922 1105 aaPredicted RBP12.04□□□□□ -0.48
PRKCH-211ENST00000555082 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 CDC45O75419 566 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
PRKCH-211ENST00000555082 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
PRKCH-211ENST00000555082 MPNDQ8N594 471 aa12.04□□□□□ -0.48
PRKCH-211ENST00000555082 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
PRKCH-211ENST00000555082 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
PRKCH-211ENST00000555082 HMMRO75330 724 aa12.03□□□□□ -0.48
PRKCH-211ENST00000555082 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
PRKCH-211ENST00000555082 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
PRKCH-211ENST00000555082 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
PRKCH-211ENST00000555082 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.48
PRKCH-211ENST00000555082 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.48
PRKCH-211ENST00000555082 TSHZ3Q63HK5 1081 aa12.02□□□□□ -0.48
PRKCH-211ENST00000555082 FBXO41Q8TF61 875 aa12.02□□□□□ -0.48
PRKCH-211ENST00000555082 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.48
PRKCH-211ENST00000555082 IL1RAPL2Q9NP60 686 aa12.02□□□□□ -0.48
PRKCH-211ENST00000555082 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.48
PRKCH-211ENST00000555082 MAP3K15Q6ZN16 1313 aa12.02□□□□□ -0.49
PRKCH-211ENST00000555082 TCIRG1Q13488 830 aa12.02□□□□□ -0.49
PRKCH-211ENST00000555082 FAM89AQ96GI7 184 aa12.02□□□□□ -0.49
PRKCH-211ENST00000555082 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
PRKCH-211ENST00000555082 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
PRKCH-211ENST00000555082 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
PRKCH-211ENST00000555082 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
PRKCH-211ENST00000555082 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
PRKCH-211ENST00000555082 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
PRKCH-211ENST00000555082 SIL1Q9H173 461 aa12.01□□□□□ -0.49
PRKCH-211ENST00000555082 LRRC4BQ9NT99 713 aa12.01□□□□□ -0.49
PRKCH-211ENST00000555082 TJP1Q07157 1748 aa12.01□□□□□ -0.49
PRKCH-211ENST00000555082 UQCRHLA0A096LP55 91 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 UTYO14607 1347 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 UQCRHP07919 91 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 CASP7P55210 303 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 POLA2Q14181 598 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 FOXD4L6Q3SYB3 417 aaPredicted RBP12□□□□□ -0.49
PRKCH-211ENST00000555082 FOXD4L3Q6VB84 417 aaPredicted RBP12□□□□□ -0.49
PRKCH-211ENST00000555082 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms