RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
SCN8A-206ENST00000550891 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
SCN8A-206ENST00000550891 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
SCN8A-206ENST00000550891 C8orf37Q96NL8 207 aa18.84■□□□□ 0.61
SCN8A-206ENST00000550891 CASP7P55210 303 aa18.84■□□□□ 0.61
SCN8A-206ENST00000550891 PLCH1Q4KWH8 1693 aa18.83■□□□□ 0.61
SCN8A-206ENST00000550891 FRAT2O75474 233 aaPredicted RBP18.83■□□□□ 0.61
SCN8A-206ENST00000550891 CWC27Q6UX04 472 aaKnown RBP18.83■□□□□ 0.61
SCN8A-206ENST00000550891 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.6
SCN8A-206ENST00000550891 CYP19A1P11511 503 aaPredicted RBP18.83■□□□□ 0.6
SCN8A-206ENST00000550891 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 HIP1O00291 1037 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 TFCP2Q12800 502 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 TAF7LQ5H9L4 462 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 BARGINQ6ZT62 677 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 RFX5P48382 616 aaPredicted RBP18.82■□□□□ 0.6
SCN8A-206ENST00000550891 CCDC57Q2TAC2 916 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
SCN8A-206ENST00000550891 LRP6O75581 1613 aa18.81■□□□□ 0.6
SCN8A-206ENST00000550891 FOXO4P98177 505 aa18.81■□□□□ 0.6
SCN8A-206ENST00000550891 GIGYF2Q6Y7W6 1299 aaKnown RBP18.81■□□□□ 0.6
SCN8A-206ENST00000550891 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
SCN8A-206ENST00000550891 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
SCN8A-206ENST00000550891 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
SCN8A-206ENST00000550891 TNNI3KQ59H18 835 aa18.81■□□□□ 0.6
SCN8A-206ENST00000550891 FPGT-TNNI3KV9GXZ4 949 aa18.81■□□□□ 0.6
SCN8A-206ENST00000550891 CD2BP2O95400 341 aaKnown RBP18.8■□□□□ 0.6
SCN8A-206ENST00000550891 ANAPC15P60006 121 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 TRIM28Q13263 835 aaKnown RBP18.8■□□□□ 0.6
SCN8A-206ENST00000550891 SGSM2O43147 1006 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 GPTP24298 496 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 FSD1Q9BTV5 496 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 ITGB4P16144 1822 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 ATP6V1AP38606 617 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 NEK4P51957 841 aa18.8■□□□□ 0.6
SCN8A-206ENST00000550891 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
SCN8A-206ENST00000550891 TLR7Q9NYK1 1049 aaKnown RBP18.8■□□□□ 0.6
SCN8A-206ENST00000550891 FAM98CQ17RN3 349 aaKnown RBP18.79■□□□□ 0.6
SCN8A-206ENST00000550891 JCADQ9P266 1359 aa18.79■□□□□ 0.6
SCN8A-206ENST00000550891 IL6STP40189 918 aaPredicted RBP18.79■□□□□ 0.6
SCN8A-206ENST00000550891 IL15P40933 162 aaPredicted RBP18.79■□□□□ 0.6
SCN8A-206ENST00000550891 DZIP3Q86Y13 1208 aaKnown RBP18.79■□□□□ 0.6
SCN8A-206ENST00000550891 FAM89AQ96GI7 184 aa18.79■□□□□ 0.6
SCN8A-206ENST00000550891 NEUROD6Q96NK8 337 aa18.79■□□□□ 0.6
SCN8A-206ENST00000550891 PCCAP05165 728 aaPredicted RBP18.78■□□□□ 0.6
SCN8A-206ENST00000550891 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
SCN8A-206ENST00000550891 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
SCN8A-206ENST00000550891 CIZ1Q9ULV3 898 aaPredicted RBP18.78■□□□□ 0.6
SCN8A-206ENST00000550891 SMARCC1Q92922 1105 aaPredicted RBP18.77■□□□□ 0.6
SCN8A-206ENST00000550891 TBC1D2BQ9UPU7 963 aa18.77■□□□□ 0.6
SCN8A-206ENST00000550891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
SCN8A-206ENST00000550891 KCNJ4P48050 445 aa18.77■□□□□ 0.6
SCN8A-206ENST00000550891 SLIT2O94813 1529 aa18.77■□□□□ 0.59
SCN8A-206ENST00000550891 MCM2P49736 904 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 LOC102724428A0A0B4J2F2 783 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 EYA2O00167 538 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 SIK1P57059 783 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 DBNLQ9UJU6 430 aaKnown RBP18.76■□□□□ 0.59
SCN8A-206ENST00000550891 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
SCN8A-206ENST00000550891 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
SCN8A-206ENST00000550891 CCDC87Q9NVE4 849 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
SCN8A-206ENST00000550891 TRMT112Q9UI30 125 aaKnown RBP18.76■□□□□ 0.59
SCN8A-206ENST00000550891 RAD50Q92878 1312 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 HLFQ16534 295 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 NUP188Q5SRE5 1749 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
SCN8A-206ENST00000550891 NRAPQ86VF7 1730 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 ERVV-1B6SEH8 477 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 ATP5JP18859 108 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 DBNDD2Q9BQY9 259 aa18.75■□□□□ 0.59
SCN8A-206ENST00000550891 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
SCN8A-206ENST00000550891 NLRP10Q86W26 655 aa18.74■□□□□ 0.59
SCN8A-206ENST00000550891 ZNF594Q96JF6 807 aaPredicted RBP18.74■□□□□ 0.59
SCN8A-206ENST00000550891 VPS72Q15906 364 aa18.74■□□□□ 0.59
SCN8A-206ENST00000550891 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
SCN8A-206ENST00000550891 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
SCN8A-206ENST00000550891 DOT1LQ8TEK3 1739 aa18.74■□□□□ 0.59
SCN8A-206ENST00000550891 HSPA4P34932 840 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 PALD1Q9ULE6 856 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 NWD2Q9ULI1 1742 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
SCN8A-206ENST00000550891 IL25Q9H293 177 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 PALLDQ8WX93 1383 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 CIAO1O76071 339 aa18.73■□□□□ 0.59
SCN8A-206ENST00000550891 CRKLP46109 303 aaKnown RBP18.73■□□□□ 0.59
SCN8A-206ENST00000550891 GPR108Q9NPR9 543 aa18.72■□□□□ 0.59
SCN8A-206ENST00000550891 IL27Q8NEV9 243 aa18.72■□□□□ 0.59
SCN8A-206ENST00000550891 LSG1Q9H089 658 aaKnown RBP18.72■□□□□ 0.59
SCN8A-206ENST00000550891 USP21Q9UK80 565 aa18.72■□□□□ 0.59
SCN8A-206ENST00000550891 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.59
SCN8A-206ENST00000550891 LRRC24Q50LG9 513 aa18.71■□□□□ 0.59
SCN8A-206ENST00000550891 ATG9AQ7Z3C6 839 aa18.71■□□□□ 0.59
SCN8A-206ENST00000550891 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
SCN8A-206ENST00000550891 PLA2G12BQ9BX93 195 aa18.71■□□□□ 0.59
SCN8A-206ENST00000550891 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
SCN8A-206ENST00000550891 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
SCN8A-206ENST00000550891 AKAP2Q9Y2D5 859 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms