RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 OVOS2A0A0G2JMS6 1433 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 MTX1Q13505 466 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 BEND3Q5T5X7 828 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 PPP1R42Q7Z4L9 355 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 RHPN1Q8TCX5 695 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 NECTIN2Q92692 538 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 CCDC102AQ96A19 550 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 TRIM44Q96DX7 344 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 ARID3AQ99856 593 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 IL25Q9H293 177 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 ANO2Q9NQ90 1003 aa6.3□□□□□ -1.4
ATPAF1-212ENST00000542495 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 CAMTA1Q9Y6Y1 1673 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 TRIM6-TRIM34B2RNG4 842 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 SGSM2O43147 1006 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 MBD3O95983 291 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 TIE1P35590 1138 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 MAP2K5Q13163 448 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 AMHR2Q16671 573 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 NBPF6Q5VWK0 638 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 NUTM2GQ5VZR2 741 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 ZSCAN30Q86W11 494 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 RILPL2Q969X0 211 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 KIF1BPQ96EK5 621 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 NBPF4Q96M43 638 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 TMEM63CQ9P1W3 806 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 RAD50Q92878 1312 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 ADAMTS7Q9UKP4 1686 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 SLIT3O75094 1523 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 ADCY9O60503 1353 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 NBPF7P0C2Y1 421 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 HSP90AB4PQ58FF6 505 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 AKAP4Q5JQC9 854 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 PARP9Q8IXQ6 854 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 DNAAF4Q8WXU2 420 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 LTV1Q96GA3 475 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 TTC14Q96N46 770 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 LSG1Q9H089 658 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 IL1RAPL2Q9NP60 686 aa6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 RBM27Q9P2N5 1060 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 NSFL1CQ9UNZ2 370 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-212ENST00000542495 TTC41PQ6P2S7 1318 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 XIRP1Q702N8 1843 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 SIPA1L3O60292 1781 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 RGPD2P0DJD1 1756 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 IRF6O14896 467 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 SRGAP3O43295 1099 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 NCLP19338 710 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 TMEM87AQ8NBN3 555 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 KCNH5Q8NCM2 988 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 ANP32BQ92688 251 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 KCNB2Q92953 911 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 CHAMP1Q96JM3 812 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 CHPF2Q9P2E5 772 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 SNX14Q9Y5W7 946 aa6.28□□□□□ -1.4
ATPAF1-212ENST00000542495 RPAP1Q9BWH6 1393 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 PI4KAP2A4QPH2 592 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 KCNQ3O43525 872 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 ONECUT3O60422 494 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 ALDH1L1O75891 902 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 FOXK1P85037 733 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 AMOTQ4VCS5 1084 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 CNTROBQ8N137 903 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 PI4KAP1Q8N8J0 262 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 UPF3BQ9BZI7 483 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 UTYO14607 1347 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 WDR33Q9C0J8 1336 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 TMEM94Q12767 1356 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 PXDNQ92626 1479 aa6.27□□□□□ -1.41
ATPAF1-212ENST00000542495 OFD1O75665 1012 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 GLRX3O76003 335 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 PLEKHO1Q53GL0 409 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 PROSER2Q86WR7 435 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 MARVELD3Q96A59 401 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 NAP1L5Q96NT1 182 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 SNRKQ9NRH2 765 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 DBF4Q9UBU7 674 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 MST1RQ04912 1400 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 SYCE3A1L190 88 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 BTBD11A6QL63 1104 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 RNMTO43148 476 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 ZNF500O60304 480 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 GIGYF1O75420 1035 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 EIF2S2P20042 333 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 MCM5P33992 734 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 TERF1P54274 439 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 TEFQ10587 303 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 ZNF530Q6P9A1 599 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 KSR2Q6VAB6 950 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 RUFY3Q7L099 469 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms