RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 PALLDQ8WX93 1383 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 MARCH10Q8NA82 808 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
PDGFRB-205ENST00000519575 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 CIAO1O76071 339 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 CASP7P55210 303 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 RABEP1Q15276 862 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 OTUD7AQ8TE49 926 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 SNX21Q969T3 373 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 KAZALD1Q96I82 304 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
PDGFRB-205ENST00000519575 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 LOC102724428A0A0B4J2F2 783 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 SIK1P57059 783 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 AACSQ86V21 672 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 ZNF330Q9Y3S2 320 aaPredicted RBP12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 LAMB2P55268 1798 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 BCORQ6W2J9 1755 aa12.32□□□□□ -0.44
PDGFRB-205ENST00000519575 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 ANAPC15P60006 121 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 CCDC57Q2TAC2 916 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 DZIP3Q86Y13 1208 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 RILPL2Q969X0 211 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 TRPC5Q9UL62 973 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 RAD50Q92878 1312 aa12.31□□□□□ -0.44
PDGFRB-205ENST00000519575 BTAF1O14981 1849 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 A0A0G2JS52 829 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 ST18O60284 1047 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 MYT1Q01538 1121 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 CNTNAP4Q9C0A0 1308 aa12.3□□□□□ -0.44
PDGFRB-205ENST00000519575 ATRNO75882 1429 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 CHMLP26374 656 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 RFX5P48382 616 aaPredicted RBP12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 FOXO4P98177 505 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 BCL11AQ9H165 835 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 SCN7AQ01118 1682 aa12.29□□□□□ -0.44
PDGFRB-205ENST00000519575 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 MCM2P49736 904 aa12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 ARXQ96QS3 562 aa12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 ABCC12Q96J65 1359 aa12.28□□□□□ -0.44
PDGFRB-205ENST00000519575 SBF2Q86WG5 1849 aa12.27□□□□□ -0.44
PDGFRB-205ENST00000519575 EYA2O00167 538 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 SASH1O94885 1247 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 ATP5JP18859 108 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 TNNI3KQ59H18 835 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 SIL1Q9H173 461 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 FPGT-TNNI3KV9GXZ4 949 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 LY75O60449 1722 aa12.27□□□□□ -0.45
PDGFRB-205ENST00000519575 ONECUT3O60422 494 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 PDE8AO60658 829 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 CSF1RP07333 972 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 EPHA10Q5JZY3 1008 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 SLC4A9Q96Q91 983 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 AFF2P51816 1311 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 ZNF609O15014 1411 aa12.26□□□□□ -0.45
PDGFRB-205ENST00000519575 MYH14Q7Z406 1995 aaKnown RBP12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 HSP90AA1P07900 732 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms