RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 DZIP3Q86Y13 1208 aaKnown RBP6.86□□□□□ -1.31
HTT-202ENST00000502820 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
HTT-202ENST00000502820 RPGRQ92834 1020 aaKnown RBP6.86□□□□□ -1.31
HTT-202ENST00000502820 CCDC102AQ96A19 550 aa6.86□□□□□ -1.31
HTT-202ENST00000502820 GPRC5DQ9NZD1 345 aa6.86□□□□□ -1.31
HTT-202ENST00000502820 LTBP1Q14766 1721 aa6.86□□□□□ -1.31
HTT-202ENST00000502820 NCAPD2Q15021 1401 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 RAD17O75943 681 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
HTT-202ENST00000502820 EIF5P55010 431 aaKnown RBP6.85□□□□□ -1.31
HTT-202ENST00000502820 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 TRPM4Q8TD43 1214 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 ZNF296Q8WUU4 475 aaPredicted RBP6.85□□□□□ -1.31
HTT-202ENST00000502820 HHIPL1Q96JK4 782 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 GBA2Q9HCG7 927 aaPredicted RBP6.85□□□□□ -1.31
HTT-202ENST00000502820 SAGE1Q9NXZ1 904 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 NIP7Q9Y221 180 aaKnown RBP eCLIP6.85□□□□□ -1.31
HTT-202ENST00000502820 RBM19Q9Y4C8 960 aaKnown RBP6.85□□□□□ -1.31
HTT-202ENST00000502820 CASP8AP2Q9UKL3 1982 aa6.85□□□□□ -1.31
HTT-202ENST00000502820 CCDC88AQ3V6T2 1871 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 SHTN1A0MZ66 631 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 POTEFA5A3E0 1075 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 ADM5C9JUS6 153 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 H7C1D1 291 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 RNMTO43148 476 aaKnown RBP6.84□□□□□ -1.31
HTT-202ENST00000502820 PKN2Q16513 984 aaKnown RBP6.84□□□□□ -1.31
HTT-202ENST00000502820 KRT26Q7Z3Y9 468 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 NGEFQ8N5V2 710 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 ZNF652Q9Y2D9 606 aa6.84□□□□□ -1.31
HTT-202ENST00000502820 FAM155AB1AL88 458 aaPredicted RBP6.83□□□□□ -1.32
HTT-202ENST00000502820 CAMTA2O94983 1202 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 HMOX1P09601 288 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 HIRAP54198 1017 aaPredicted RBP6.83□□□□□ -1.32
HTT-202ENST00000502820 CXCL9Q07325 125 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 TEFQ10587 303 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 TBC1D10BQ4KMP7 808 aaPredicted RBP6.83□□□□□ -1.32
HTT-202ENST00000502820 SAMD7Q7Z3H4 446 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 DCPSQ96C86 337 aaKnown RBP6.83□□□□□ -1.32
HTT-202ENST00000502820 PSMD1Q99460 953 aa6.83□□□□□ -1.32
HTT-202ENST00000502820 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
HTT-202ENST00000502820 ZBTB12Q9Y330 459 aaPredicted RBP6.83□□□□□ -1.32
HTT-202ENST00000502820 MYH14Q7Z406 1995 aaKnown RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 COL5A3P25940 1745 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 EN2P19622 333 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 IL6STP40189 918 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 FBXO46Q6PJ61 603 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 CHRDL2Q6WN34 429 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 MICALL2Q8IY33 904 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 VSIG10Q8N0Z9 540 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 ZNF496Q96IT1 587 aaPredicted RBP6.82□□□□□ -1.32
HTT-202ENST00000502820 ZNRF3Q9ULT6 936 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 SCN4AP35499 1836 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 KIF20BQ96Q89 1820 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 NPC1L1Q9UHC9 1359 aa6.82□□□□□ -1.32
HTT-202ENST00000502820 ANKRD26Q9UPS8 1709 aa6.81□□□□□ -1.32
HTT-202ENST00000502820 CNGB1Q14028 1251 aaPredicted RBP6.81□□□□□ -1.32
HTT-202ENST00000502820 TNIP1Q15025 636 aa6.81□□□□□ -1.32
HTT-202ENST00000502820 RBM17Q96I25 401 aaKnown RBP6.81□□□□□ -1.32
HTT-202ENST00000502820 TEX13AQ9BXU3 409 aaPredicted RBP6.81□□□□□ -1.32
HTT-202ENST00000502820 PANK3Q9H999 370 aa6.81□□□□□ -1.32
HTT-202ENST00000502820 TRIM17Q9Y577 477 aa6.81□□□□□ -1.32
HTT-202ENST00000502820 AFDNP55196 1824 aaKnown RBP6.8□□□□□ -1.32
HTT-202ENST00000502820 SLX4Q8IY92 1834 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 H0YGN5 161 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 GPR25O00155 361 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 SLC10A3P09131 477 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 GPTP24298 496 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 SULF1Q8IWU6 871 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 ZC3H15Q8WU90 426 aaKnown RBP6.8□□□□□ -1.32
HTT-202ENST00000502820 TMEM106CQ9BVX2 250 aa6.8□□□□□ -1.32
HTT-202ENST00000502820 SCAF8Q9UPN6 1271 aaKnown RBP6.8□□□□□ -1.32
HTT-202ENST00000502820 THSD7BQ9C0I4 1608 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 PDE4DIPQ5VU43 2346 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 KIF7Q2M1P5 1343 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 TJP1Q07157 1748 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 PRAMEF22A3QJZ6 481 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 UBE2Q2LH0YL09 131 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 RIMBP2O15034 1052 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 FKTNO75072 461 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 PRKG1Q13976 671 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 MTHFSDQ2M296 383 aaKnown RBP6.79□□□□□ -1.32
HTT-202ENST00000502820 SLC4A8Q2Y0W8 1093 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 AMER1Q5JTC6 1135 aaPredicted RBP6.79□□□□□ -1.32
HTT-202ENST00000502820 CC2D2BQ6DHV5 1058 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 ZNF790Q6PG37 636 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 DPP8Q6V1X1 898 aaPredicted RBP6.79□□□□□ -1.32
HTT-202ENST00000502820 MOB2Q70IA6 237 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 MORC1Q86VD1 984 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 RASAL3Q86YV0 1011 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 DPF3Q92784 378 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 FMNL2Q96PY5 1086 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 ADAMTSL1Q8N6G6 1762 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 FER1L6Q2WGJ9 1857 aa6.79□□□□□ -1.32
HTT-202ENST00000502820 COL11A2P13942 1736 aaPredicted RBP6.79□□□□□ -1.32
HTT-202ENST00000502820 DLEC1Q9Y238 1755 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 BTBD11A6QL63 1104 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms