RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-202ENST00000502818 STARD3NLO95772 234 aa9.08□□□□□ -0.96
CPNE4-202ENST00000502818 GSPT1P15170 499 aaKnown RBP9.08□□□□□ -0.96
CPNE4-202ENST00000502818 CRKLP46109 303 aaKnown RBP9.08□□□□□ -0.96
CPNE4-202ENST00000502818 NEXNQ0ZGT2 675 aa9.08□□□□□ -0.96
CPNE4-202ENST00000502818 NBR1Q14596 966 aa9.08□□□□□ -0.96
CPNE4-202ENST00000502818 LINC00116Q8NCU8 138 aa9.08□□□□□ -0.96
CPNE4-202ENST00000502818 IL1RAPL2Q9NP60 686 aa9.08□□□□□ -0.96
CPNE4-202ENST00000502818 TRPC5Q9UL62 973 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-202ENST00000502818 IBTKQ9P2D0 1353 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-202ENST00000502818 SURF6O75683 361 aaKnown RBP9.08□□□□□ -0.96
CPNE4-202ENST00000502818 AMIGO3Q86WK7 504 aa9.08□□□□□ -0.96
CPNE4-202ENST00000502818 NUP188Q5SRE5 1749 aa9.07□□□□□ -0.96
CPNE4-202ENST00000502818 HMMRO75330 724 aa9.07□□□□□ -0.96
CPNE4-202ENST00000502818 GPTP24298 496 aa9.07□□□□□ -0.96
CPNE4-202ENST00000502818 TEX13AQ9BXU3 409 aaPredicted RBP9.07□□□□□ -0.96
CPNE4-202ENST00000502818 IPO9Q96P70 1041 aaKnown RBP9.07□□□□□ -0.96
CPNE4-202ENST00000502818 ISCA1Q9BUE6 129 aa9.07□□□□□ -0.96
CPNE4-202ENST00000502818 MYH14Q7Z406 1995 aaKnown RBP9.06□□□□□ -0.96
CPNE4-202ENST00000502818 H7C1W4 665 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 EIF5P55010 431 aaKnown RBP9.06□□□□□ -0.96
CPNE4-202ENST00000502818 FOXO4P98177 505 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 TCIRG1Q13488 830 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 MTX1Q13505 466 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 SIL1Q9H173 461 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 MAP3K15Q6ZN16 1313 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 SALL3Q9BXA9 1300 aa9.06□□□□□ -0.96
CPNE4-202ENST00000502818 RFX5P48382 616 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-202ENST00000502818 DZIP3Q86Y13 1208 aaKnown RBP9.05□□□□□ -0.96
CPNE4-202ENST00000502818 RHPN1Q8TCX5 695 aa9.05□□□□□ -0.96
CPNE4-202ENST00000502818 FAM89AQ96GI7 184 aa9.05□□□□□ -0.96
CPNE4-202ENST00000502818 LRRCC1Q9C099 1032 aa9.05□□□□□ -0.96
CPNE4-202ENST00000502818 CWC25Q9NXE8 425 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-202ENST00000502818 GIGYF2Q6Y7W6 1299 aaKnown RBP9.05□□□□□ -0.96
CPNE4-202ENST00000502818 UBE2Q2Q8WVN8 375 aa9.05□□□□□ -0.96
CPNE4-202ENST00000502818 CCDC85AQ96PX6 553 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-202ENST00000502818 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
CPNE4-202ENST00000502818 SASH1O94885 1247 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
CPNE4-202ENST00000502818 IL6STP40189 918 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-202ENST00000502818 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
CPNE4-202ENST00000502818 FAM177BA6PVY3 158 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 PDE1AP54750 535 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 CCDC191Q8NCU4 936 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-202ENST00000502818 LRRC4BQ9NT99 713 aa9.04□□□□□ -0.96
CPNE4-202ENST00000502818 RGS17Q9UGC6 210 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-202ENST00000502818 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
CPNE4-202ENST00000502818 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
CPNE4-202ENST00000502818 RABL6Q3YEC7 729 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-202ENST00000502818 BMP2KLQ5H9B9 411 aa9.03□□□□□ -0.96
CPNE4-202ENST00000502818 SMARCC1Q92922 1105 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-202ENST00000502818 TLR7Q9NYK1 1049 aaKnown RBP9.03□□□□□ -0.96
CPNE4-202ENST00000502818 DAXXQ9UER7 740 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-202ENST00000502818 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-202ENST00000502818 BTAF1O14981 1849 aa9.03□□□□□ -0.96
CPNE4-202ENST00000502818 MAP4K4O95819 1239 aaPredicted RBP9.02□□□□□ -0.96
CPNE4-202ENST00000502818 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.96
CPNE4-202ENST00000502818 TRIM37O94972 964 aa9.02□□□□□ -0.97
CPNE4-202ENST00000502818 SDSP20132 328 aa9.02□□□□□ -0.97
CPNE4-202ENST00000502818 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.97
CPNE4-202ENST00000502818 OS9Q13438 667 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-202ENST00000502818 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
CPNE4-202ENST00000502818 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.97
CPNE4-202ENST00000502818 ZNF34Q8IZ26 560 aa9.02□□□□□ -0.97
CPNE4-202ENST00000502818 PUS3Q9BZE2 481 aaKnown RBP9.02□□□□□ -0.97
CPNE4-202ENST00000502818 SRP68Q9UHB9 627 aaKnown RBP9.02□□□□□ -0.97
CPNE4-202ENST00000502818 CCNL1Q9UK58 526 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-202ENST00000502818 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
CPNE4-202ENST00000502818 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 RAB11FIP3O75154 756 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 MX1P20591 662 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 TRIM28Q13263 835 aaKnown RBP9.01□□□□□ -0.97
CPNE4-202ENST00000502818 KRT27Q7Z3Y8 459 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 EAF2Q96CJ1 260 aaPredicted RBP9.01□□□□□ -0.97
CPNE4-202ENST00000502818 BCL2L12Q9HB09 334 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 NHSQ6T4R5 1651 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 COL15A1P39059 1388 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 LRRC24Q50LG9 513 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 KIF1BPQ96EK5 621 aa9.01□□□□□ -0.97
CPNE4-202ENST00000502818 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
CPNE4-202ENST00000502818 ERVV-1B6SEH8 477 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 PCCAP05165 728 aaPredicted RBP9□□□□□ -0.97
CPNE4-202ENST00000502818 SLC4A3P48751 1232 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 TFCP2Q12800 502 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 POTEAQ6S8J7 498 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
CPNE4-202ENST00000502818 PI4K2BQ8TCG2 481 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 SBF2Q86WG5 1849 aa9□□□□□ -0.97
CPNE4-202ENST00000502818 COL5A3P25940 1745 aaPredicted RBP9□□□□□ -0.97
CPNE4-202ENST00000502818 RREB1Q92766 1687 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms