RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 APBA3O96018 575 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 CASP7P55210 303 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -1
GPATCH4-209ENST00000498641 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 SLC27A3Q5K4L6 730 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 LMBR1LQ6UX01 489 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 C16orf71Q8IYS4 520 aaPredicted RBP8.79□□□□□ -1
GPATCH4-209ENST00000498641 ZNF34Q8IZ26 560 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 ZBTB38Q8NAP3 1195 aaPredicted RBP8.79□□□□□ -1
GPATCH4-209ENST00000498641 FAM89AQ96GI7 184 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 NIP7Q9Y221 180 aaKnown RBP eCLIP8.79□□□□□ -1
GPATCH4-209ENST00000498641 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
GPATCH4-209ENST00000498641 PHF14O94880 888 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 RFC4P35249 363 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 FOXO4P98177 505 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 FAM161AQ3B820 660 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 PARP10Q53GL7 1025 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 CLEC4GQ6UXB4 293 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 SMIM5Q71RC9 77 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 ERC1Q8IUD2 1116 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 KIF1BPQ96EK5 621 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 UTP14AQ9BVJ6 771 aaKnown RBP8.78□□□□□ -1
GPATCH4-209ENST00000498641 LRRC4BQ9NT99 713 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 PA2G4Q9UQ80 394 aaKnown RBP8.78□□□□□ -1
GPATCH4-209ENST00000498641 ARFGEF2Q9Y6D5 1785 aa8.78□□□□□ -1
GPATCH4-209ENST00000498641 BTAF1O14981 1849 aa8.77□□□□□ -1
GPATCH4-209ENST00000498641 IRS4O14654 1257 aaPredicted RBP8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 HSP90B1P14625 803 aaKnown RBP8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 TXNRD1Q16881 649 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 RABL6Q3YEC7 729 aaPredicted RBP8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 SUSD4Q5VX71 490 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 RHPN1Q8TCX5 695 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 BACH2Q9BYV9 841 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 SIL1Q9H173 461 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 IL1RAPL2Q9NP60 686 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 NARFQ9UHQ1 456 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 NOP58Q9Y2X3 529 aaKnown RBP8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 CDHR2Q9BYE9 1310 aa8.77□□□□□ -1.01
GPATCH4-209ENST00000498641 PLSCR1O15162 318 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 GTF2E1P29083 439 aaPredicted RBP8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 BICDL1Q6ZP65 573 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 PLEKHM2Q8IWE5 1019 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 SYNE4Q8N205 404 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 KLHDC4Q8TBB5 520 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 OTUD7AQ8TE49 926 aaPredicted RBP8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 PLA2G12BQ9BX93 195 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 SRP68Q9UHB9 627 aaKnown RBP8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 NUP188Q5SRE5 1749 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 UBN2Q6ZU65 1347 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 SH3TC1Q8TE82 1336 aa8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
GPATCH4-209ENST00000498641 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 RGL2O15211 777 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 PDE8AO60658 829 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 RFX5P48382 616 aaPredicted RBP8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 PTPN12Q05209 780 aaKnown RBP8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 CLASRPQ8N2M8 674 aaKnown RBP8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 CCDC85AQ96PX6 553 aaPredicted RBP8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 SETDB2Q96T68 719 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 COPRSQ9NQ92 184 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 RREB1Q92766 1687 aa8.75□□□□□ -1.01
GPATCH4-209ENST00000498641 NPHP1O15259 732 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 CSF1RP07333 972 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 IFIT2P09913 472 aaKnown RBP8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 HCLS1P14317 486 aaPredicted RBP8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 MX1P20591 662 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 PDE1AP54750 535 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 CTSWP56202 376 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 CACNB1Q02641 598 aaPredicted RBP8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 IFIT5Q13325 482 aaKnown RBP8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 C8orf34Q49A92 452 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 BMP2KLQ5H9B9 411 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 TTC22Q5TAA0 569 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 TBC1D9BQ66K14 1250 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 PROM2Q8N271 834 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 BCL2L12Q9HB09 334 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 TFCP2L1Q9NZI6 479 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 BRWD3Q6RI45 1802 aa8.74□□□□□ -1.01
GPATCH4-209ENST00000498641 ANKRD18BA2A2Z9 1011 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 SASH1O94885 1247 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 NTSR2O95665 410 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 SSFA2P28290 1259 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 TFCP2Q12800 502 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 SF3B2Q13435 895 aaKnown RBP8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 AACSQ86V21 672 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 AMIGO3Q86WK7 504 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 NBPF5PQ86XG9 351 aaPredicted RBP8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 GPATCH3Q96I76 525 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 ZNF594Q96JF6 807 aaPredicted RBP8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 NYXQ9GZU5 481 aa8.73□□□□□ -1.01
GPATCH4-209ENST00000498641 COL5A3P25940 1745 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms