RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 ITPRIPQ8IWB1 547 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 TMEM57Q8N5G2 664 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
NUP188-207ENST00000487952 NYXQ9GZU5 481 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 CASZ1Q86V15 1759 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 SUSD4Q5VX71 490 aa17.74■□□□□ 0.43
NUP188-207ENST00000487952 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
NUP188-207ENST00000487952 RNF123Q5XPI4 1314 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
NUP188-207ENST00000487952 SERPINB2P05120 415 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 RLBP1P12271 317 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 DDR1Q08345 913 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 GCKRQ14397 625 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 TPTE2Q6XPS3 522 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 SPON1Q9HCB6 807 aa17.73■□□□□ 0.43
NUP188-207ENST00000487952 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
NUP188-207ENST00000487952 ANKRD36CQ5JPF3 1778 aa17.72■□□□□ 0.43
NUP188-207ENST00000487952 IBTKQ9P2D0 1353 aaPredicted RBP17.72■□□□□ 0.43
NUP188-207ENST00000487952 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
NUP188-207ENST00000487952 COG6Q9Y2V7 657 aa17.72■□□□□ 0.43
NUP188-207ENST00000487952 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
NUP188-207ENST00000487952 NTSR2O95665 410 aa17.71■□□□□ 0.43
NUP188-207ENST00000487952 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
NUP188-207ENST00000487952 ST5P78524 1137 aa17.71■□□□□ 0.43
NUP188-207ENST00000487952 C20orf194Q5TEA3 1177 aa17.71■□□□□ 0.43
NUP188-207ENST00000487952 ZBTB38Q8NAP3 1195 aaPredicted RBP17.71■□□□□ 0.43
NUP188-207ENST00000487952 GRM8O00222 908 aa17.7■□□□□ 0.42
NUP188-207ENST00000487952 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
NUP188-207ENST00000487952 MVPQ14764 893 aaKnown RBP17.7■□□□□ 0.42
NUP188-207ENST00000487952 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
NUP188-207ENST00000487952 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
NUP188-207ENST00000487952 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
NUP188-207ENST00000487952 GNAI3P08754 354 aa17.69■□□□□ 0.42
NUP188-207ENST00000487952 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
NUP188-207ENST00000487952 NUTM1Q86Y26 1132 aa17.69■□□□□ 0.42
NUP188-207ENST00000487952 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
NUP188-207ENST00000487952 HDAC5Q9UQL6 1122 aa17.69■□□□□ 0.42
NUP188-207ENST00000487952 AFDNP55196 1824 aaKnown RBP17.68■□□□□ 0.42
NUP188-207ENST00000487952 UBTFL1P0CB47 393 aaPredicted RBP17.68■□□□□ 0.42
NUP188-207ENST00000487952 PRR5LQ6MZQ0 368 aa17.68■□□□□ 0.42
NUP188-207ENST00000487952 JARID2Q92833 1246 aaPredicted RBP17.68■□□□□ 0.42
NUP188-207ENST00000487952 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
NUP188-207ENST00000487952 H7C1W4 665 aa17.67■□□□□ 0.42
NUP188-207ENST00000487952 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
NUP188-207ENST00000487952 NEFLP07196 543 aa17.67■□□□□ 0.42
NUP188-207ENST00000487952 ERFEQ4G0M1 354 aa17.67■□□□□ 0.42
NUP188-207ENST00000487952 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
NUP188-207ENST00000487952 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
NUP188-207ENST00000487952 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
NUP188-207ENST00000487952 MEIS3Q99687 375 aa17.66■□□□□ 0.42
NUP188-207ENST00000487952 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
NUP188-207ENST00000487952 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
NUP188-207ENST00000487952 HCLS1P14317 486 aaPredicted RBP17.65■□□□□ 0.42
NUP188-207ENST00000487952 PTGER2P43116 358 aa17.65■□□□□ 0.42
NUP188-207ENST00000487952 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
NUP188-207ENST00000487952 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
NUP188-207ENST00000487952 UTYO14607 1347 aa17.65■□□□□ 0.42
NUP188-207ENST00000487952 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
NUP188-207ENST00000487952 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
NUP188-207ENST00000487952 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
NUP188-207ENST00000487952 NLRP3Q96P20 1036 aa17.64■□□□□ 0.41
NUP188-207ENST00000487952 SGIP1Q9BQI5 828 aa17.64■□□□□ 0.41
NUP188-207ENST00000487952 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
NUP188-207ENST00000487952 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
NUP188-207ENST00000487952 PDE8AO60658 829 aa17.63■□□□□ 0.41
NUP188-207ENST00000487952 GNAI2P04899 355 aa17.63■□□□□ 0.41
NUP188-207ENST00000487952 CASP7P55210 303 aa17.63■□□□□ 0.41
NUP188-207ENST00000487952 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
NUP188-207ENST00000487952 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
NUP188-207ENST00000487952 BRIP1Q9BX63 1249 aa17.63■□□□□ 0.41
NUP188-207ENST00000487952 PDE6BP35913 854 aa17.62■□□□□ 0.41
NUP188-207ENST00000487952 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
NUP188-207ENST00000487952 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
NUP188-207ENST00000487952 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
NUP188-207ENST00000487952 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
NUP188-207ENST00000487952 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
NUP188-207ENST00000487952 CTSWP56202 376 aa17.6■□□□□ 0.41
NUP188-207ENST00000487952 PDZRN3Q9UPQ7 1066 aa17.6■□□□□ 0.41
NUP188-207ENST00000487952 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
NUP188-207ENST00000487952 CCDC152Q4G0S7 254 aa17.59■□□□□ 0.41
NUP188-207ENST00000487952 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
NUP188-207ENST00000487952 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
NUP188-207ENST00000487952 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
NUP188-207ENST00000487952 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
NUP188-207ENST00000487952 H0YIN7 160 aa17.58■□□□□ 0.4
NUP188-207ENST00000487952 C2CD5Q86YS7 1000 aa17.58■□□□□ 0.4
NUP188-207ENST00000487952 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
NUP188-207ENST00000487952 CD2APQ9Y5K6 639 aa17.58■□□□□ 0.4
NUP188-207ENST00000487952 AAMPQ13685 434 aa17.57■□□□□ 0.4
NUP188-207ENST00000487952 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
NUP188-207ENST00000487952 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
NUP188-207ENST00000487952 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
NUP188-207ENST00000487952 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
NUP188-207ENST00000487952 FOXO4P98177 505 aa17.56■□□□□ 0.4
NUP188-207ENST00000487952 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
NUP188-207ENST00000487952 DDX46Q7L014 1031 aaKnown RBP17.56■□□□□ 0.4
NUP188-207ENST00000487952 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
NUP188-207ENST00000487952 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
NUP188-207ENST00000487952 KAZALD1Q96I82 304 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms