RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 GCKRQ14397 625 aa13.18□□□□□ -0.3
LRRTM4-204ENST00000409884 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
LRRTM4-204ENST00000409884 NEXNQ0ZGT2 675 aa13.17□□□□□ -0.3
LRRTM4-204ENST00000409884 ITPK1Q13572 414 aa13.17□□□□□ -0.3
LRRTM4-204ENST00000409884 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
LRRTM4-204ENST00000409884 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
LRRTM4-204ENST00000409884 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
LRRTM4-204ENST00000409884 HMMRO75330 724 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 STARD3NLO95772 234 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 TSHZ3Q63HK5 1081 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 SMIM5Q71RC9 77 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 MMP14P50281 582 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 SIK1P57059 783 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 TPRNQ4KMQ1 711 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
LRRTM4-204ENST00000409884 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 TJP1Q07157 1748 aa13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 HLFQ16534 295 aa13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 L1TD1Q5T7N2 865 aaKnown RBP13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
LRRTM4-204ENST00000409884 A0A087WZG4 1122 aa13.15□□□□□ -0.31
LRRTM4-204ENST00000409884 SURF6O75683 361 aaKnown RBP13.15□□□□□ -0.31
LRRTM4-204ENST00000409884 POLA2Q14181 598 aa13.15□□□□□ -0.31
LRRTM4-204ENST00000409884 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.31
LRRTM4-204ENST00000409884 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
LRRTM4-204ENST00000409884 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
LRRTM4-204ENST00000409884 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
LRRTM4-204ENST00000409884 UTYO14607 1347 aa13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 CLGNO14967 610 aa13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 ATRNO75882 1429 aa13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 GPTP24298 496 aa13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
LRRTM4-204ENST00000409884 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
LRRTM4-204ENST00000409884 CASP7P55210 303 aa13.12□□□□□ -0.31
LRRTM4-204ENST00000409884 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
LRRTM4-204ENST00000409884 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
LRRTM4-204ENST00000409884 SIL1Q9H173 461 aa13.12□□□□□ -0.31
LRRTM4-204ENST00000409884 FAM193AP78312 1265 aa13.11□□□□□ -0.31
LRRTM4-204ENST00000409884 KIF20AO95235 890 aa13.11□□□□□ -0.31
LRRTM4-204ENST00000409884 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
LRRTM4-204ENST00000409884 NUTM1Q86Y26 1132 aa13.11□□□□□ -0.31
LRRTM4-204ENST00000409884 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
LRRTM4-204ENST00000409884 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 MTX1Q13505 466 aa13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
LRRTM4-204ENST00000409884 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 H7C1W4 665 aa13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 TMED8Q6PL24 325 aaPredicted RBP13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 BTAF1O14981 1849 aa13.09□□□□□ -0.31
LRRTM4-204ENST00000409884 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 OS9Q13438 667 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 LMBR1LQ6UX01 489 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 FAM177BA6PVY3 158 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 PDE1AP54750 535 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 FOXO4P98177 505 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 TTC22Q5TAA0 569 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
LRRTM4-204ENST00000409884 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 TAF3Q5VWG9 929 aa13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 SMARCC1Q92922 1105 aaPredicted RBP13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 SASH1O94885 1247 aa13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
LRRTM4-204ENST00000409884 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
LRRTM4-204ENST00000409884 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
LRRTM4-204ENST00000409884 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms