RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AACSQ86V21 672 aa24.29■■□□□ 1.48
PDLIM5-205ENST00000380180 FNBP4Q8N3X1 1017 aaPredicted RBP24.29■■□□□ 1.48
PDLIM5-205ENST00000380180 ZBTB1Q9Y2K1 713 aa24.29■■□□□ 1.48
PDLIM5-205ENST00000380180 MAP4K4O95819 1239 aaPredicted RBP24.28■■□□□ 1.48
PDLIM5-205ENST00000380180 CHMLP26374 656 aa24.28■■□□□ 1.48
PDLIM5-205ENST00000380180 CERKQ8TCT0 537 aa24.28■■□□□ 1.48
PDLIM5-205ENST00000380180 MAP3K15Q6ZN16 1313 aa24.28■■□□□ 1.48
PDLIM5-205ENST00000380180 REC8O95072 547 aa24.28■■□□□ 1.48
PDLIM5-205ENST00000380180 EAF2Q96CJ1 260 aaPredicted RBP24.28■■□□□ 1.48
PDLIM5-205ENST00000380180 TRIM28Q13263 835 aaKnown RBP24.27■■□□□ 1.48
PDLIM5-205ENST00000380180 SPATA31A6Q5VVP1 1343 aa24.27■■□□□ 1.48
PDLIM5-205ENST00000380180 ANKRD36CQ5JPF3 1778 aa24.27■■□□□ 1.48
PDLIM5-205ENST00000380180 ECHDC1Q9NTX5 307 aa24.27■■□□□ 1.48
PDLIM5-205ENST00000380180 GLRX3O76003 335 aaKnown RBP24.26■■□□□ 1.47
PDLIM5-205ENST00000380180 GIGYF2Q6Y7W6 1299 aaKnown RBP24.26■■□□□ 1.47
PDLIM5-205ENST00000380180 ESYT1Q9BSJ8 1104 aa24.26■■□□□ 1.47
PDLIM5-205ENST00000380180 NBR1Q14596 966 aa24.25■■□□□ 1.47
PDLIM5-205ENST00000380180 GPATCH3Q96I76 525 aa24.25■■□□□ 1.47
PDLIM5-205ENST00000380180 CHMP3Q9Y3E7 222 aa24.25■■□□□ 1.47
PDLIM5-205ENST00000380180 HLFQ16534 295 aa24.25■■□□□ 1.47
PDLIM5-205ENST00000380180 CCDC8Q9H0W5 538 aaPredicted RBP24.25■■□□□ 1.47
PDLIM5-205ENST00000380180 KCNQ2O43526 872 aa24.24■■□□□ 1.47
PDLIM5-205ENST00000380180 ATP6V1AP38606 617 aa24.24■■□□□ 1.47
PDLIM5-205ENST00000380180 IL6STP40189 918 aaPredicted RBP24.24■■□□□ 1.47
PDLIM5-205ENST00000380180 MYH14Q7Z406 1995 aaKnown RBP24.24■■□□□ 1.47
PDLIM5-205ENST00000380180 CNTROBQ8N137 903 aa24.23■■□□□ 1.47
PDLIM5-205ENST00000380180 SNX21Q969T3 373 aa24.23■■□□□ 1.47
PDLIM5-205ENST00000380180 USP21Q9UK80 565 aa24.23■■□□□ 1.47
PDLIM5-205ENST00000380180 LOC102724428A0A0B4J2F2 783 aa24.23■■□□□ 1.47
PDLIM5-205ENST00000380180 SIK1P57059 783 aa24.23■■□□□ 1.47
PDLIM5-205ENST00000380180 HSCBQ8IWL3 235 aa24.23■■□□□ 1.47
PDLIM5-205ENST00000380180 TLR7Q9NYK1 1049 aaKnown RBP24.22■■□□□ 1.47
PDLIM5-205ENST00000380180 TFCP2Q12800 502 aa24.21■■□□□ 1.47
PDLIM5-205ENST00000380180 TBC1D2BQ9UPU7 963 aa24.21■■□□□ 1.47
PDLIM5-205ENST00000380180 PCCAP05165 728 aaPredicted RBP24.2■■□□□ 1.47
PDLIM5-205ENST00000380180 HSP90AB3PQ58FF7 597 aa24.2■■□□□ 1.47
PDLIM5-205ENST00000380180 INTS5Q6P9B9 1019 aaKnown RBP24.2■■□□□ 1.47
PDLIM5-205ENST00000380180 DZIP3Q86Y13 1208 aaKnown RBP24.2■■□□□ 1.47
PDLIM5-205ENST00000380180 FAM89AQ96GI7 184 aa24.2■■□□□ 1.47
PDLIM5-205ENST00000380180 SLKQ9H2G2 1235 aaPredicted RBP24.2■■□□□ 1.47
PDLIM5-205ENST00000380180 PALLDQ8WX93 1383 aa24.2■■□□□ 1.46
PDLIM5-205ENST00000380180 CICQ96RK0 1608 aaPredicted RBP24.2■■□□□ 1.46
PDLIM5-205ENST00000380180 ZBTB38Q8NAP3 1195 aaPredicted RBP24.2■■□□□ 1.46
PDLIM5-205ENST00000380180 GPTP24298 496 aa24.19■■□□□ 1.46
PDLIM5-205ENST00000380180 ITPK1Q13572 414 aa24.19■■□□□ 1.46
PDLIM5-205ENST00000380180 CCDC87Q9NVE4 849 aa24.19■■□□□ 1.46
PDLIM5-205ENST00000380180 ERVV-1B6SEH8 477 aa24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 CRKLP46109 303 aaKnown RBP24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 MYT1Q01538 1121 aa24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 NLRP10Q86W26 655 aa24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 SPRYD3Q8NCJ5 442 aa24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 SMARCC1Q92922 1105 aaPredicted RBP24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 MYH3P11055 1940 aa24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 RREB1Q92766 1687 aa24.18■■□□□ 1.46
PDLIM5-205ENST00000380180 TNNI3KQ59H18 835 aa24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 ANTXR1Q9H6X2 564 aa24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 FPGT-TNNI3KV9GXZ4 949 aa24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 CD2BP2O95400 341 aaKnown RBP24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 HSPA1LP34931 641 aa24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 RABEP1Q15276 862 aa24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 IL25Q9H293 177 aa24.17■■□□□ 1.46
PDLIM5-205ENST00000380180 ATG9AQ7Z3C6 839 aa24.16■■□□□ 1.46
PDLIM5-205ENST00000380180 PLA2G12BQ9BX93 195 aa24.16■■□□□ 1.46
PDLIM5-205ENST00000380180 ANO2Q9NQ90 1003 aa24.16■■□□□ 1.46
PDLIM5-205ENST00000380180 COL5A3P25940 1745 aaPredicted RBP24.16■■□□□ 1.46
PDLIM5-205ENST00000380180 SYNE4Q8N205 404 aa24.15■■□□□ 1.46
PDLIM5-205ENST00000380180 ZNF594Q96JF6 807 aaPredicted RBP24.15■■□□□ 1.46
PDLIM5-205ENST00000380180 MEX3CQ5U5Q3 659 aaKnown RBP24.15■■□□□ 1.46
PDLIM5-205ENST00000380180 EVI5LQ96CN4 794 aa24.15■■□□□ 1.46
PDLIM5-205ENST00000380180 DBNLQ9UJU6 430 aaKnown RBP24.15■■□□□ 1.46
PDLIM5-205ENST00000380180 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
PDLIM5-205ENST00000380180 CDHR2Q9BYE9 1310 aa24.14■■□□□ 1.45
PDLIM5-205ENST00000380180 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
PDLIM5-205ENST00000380180 BOLA2Q9H3K6 86 aa24.13■■□□□ 1.45
PDLIM5-205ENST00000380180 EYA2O00167 538 aa24.13■■□□□ 1.45
PDLIM5-205ENST00000380180 SGSM2O43147 1006 aa24.13■■□□□ 1.45
PDLIM5-205ENST00000380180 IL15P40933 162 aaPredicted RBP24.13■■□□□ 1.45
PDLIM5-205ENST00000380180 CCDC57Q2TAC2 916 aa24.13■■□□□ 1.45
PDLIM5-205ENST00000380180 CSF1RP07333 972 aa24.12■■□□□ 1.45
PDLIM5-205ENST00000380180 LRRC24Q50LG9 513 aa24.12■■□□□ 1.45
PDLIM5-205ENST00000380180 CWC27Q6UX04 472 aaKnown RBP24.12■■□□□ 1.45
PDLIM5-205ENST00000380180 ZNF34Q8IZ26 560 aa24.12■■□□□ 1.45
PDLIM5-205ENST00000380180 TRMT112Q9UI30 125 aaKnown RBP24.11■■□□□ 1.45
PDLIM5-205ENST00000380180 PTF1AQ7RTS3 328 aa24.11■■□□□ 1.45
PDLIM5-205ENST00000380180 CCDC85AQ96PX6 553 aaPredicted RBP24.11■■□□□ 1.45
PDLIM5-205ENST00000380180 BTAF1O14981 1849 aa24.11■■□□□ 1.45
PDLIM5-205ENST00000380180 CIAO1O76071 339 aa24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 DBNDD2Q9BQY9 259 aa24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 PUS3Q9BZE2 481 aaKnown RBP24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 DIAPH3Q9NSV4 1193 aa24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 UBN2Q6ZU65 1347 aa24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 K7ELQ4 463 aaPredicted RBP24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 EPB41L2O43491 1005 aaKnown RBP24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 ATP5JP18859 108 aa24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 MCCP23508 829 aa24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 GJD4Q96KN9 370 aaPredicted RBP24.1■■□□□ 1.45
PDLIM5-205ENST00000380180 NFKBIBQ15653 356 aa24.09■■□□□ 1.45
PDLIM5-205ENST00000380180 GPR108Q9NPR9 543 aa24.09■■□□□ 1.45
PDLIM5-205ENST00000380180 IRS4O14654 1257 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms