RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FLT4P35916 1363 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 KCNQ3O43525 872 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 MMP14P50281 582 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 AIMP1Q12904 312 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 TTC6Q86TZ1 520 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 TMEM87AQ8NBN3 555 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 DNAAF4Q8WXU2 420 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 CTNNA3Q9UI47 895 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 CTIFO43310 598 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 KIAA1524Q8TCG1 905 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 BOLA2Q9H3K6 86 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 YY1AP1Q9H869 796 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 GEMIN8Q9NWZ8 242 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 NRBP1Q9UHY1 535 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 TPCN1Q9ULQ1 816 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 RBM8AQ9Y5S9 174 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 DLC1Q96QB1 1528 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 ANO6Q4KMQ2 910 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 GPATCH3Q96I76 525 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
CDC42SE1-201ENST00000357235 TYRO3Q06418 890 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 TEFQ10587 303 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 CWF19L2Q2TBE0 894 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 CHMP4CQ96CF2 233 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 DDX11Q96FC9 970 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 EFCC1Q9HA90 598 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 ECHDC1Q9NTX5 307 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 TAOK2Q9UL54 1235 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 USP6P35125 1406 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 HSP90AB4PQ58FF6 505 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 VPS53Q5VIR6 699 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 FSD1Q9BTV5 496 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 ARHGEF10O15013 1369 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 AOX1Q06278 1338 aa9.73□□□□□ -0.85
CDC42SE1-201ENST00000357235 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 HSP90B1P14625 803 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 KRT222Q8N1A0 295 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 MORC2Q9Y6X9 1032 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 IGSF1Q8N6C5 1336 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 RIMS1Q86UR5 1692 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 CREB3L3Q68CJ9 461 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 MPRIPQ6WCQ1 1025 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 KLHDC4Q8TBB5 520 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 FUCA2Q9BTY2 467 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 DNAJC25Q9H1X3 360 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 SH2B1Q9NRF2 756 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 FEZ2Q9UHY8 353 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 OVOS2A0A0J9YW53 1432 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 OVOS2Q6IE36 1432 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 HOXC9P31274 260 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 NCBP1Q09161 790 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 NMIQ13287 307 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 POLA2Q14181 598 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 RBM33Q96EV2 1170 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 ZSCAN31Q96LW9 406 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 MAP3K2Q9Y2U5 619 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
CDC42SE1-201ENST00000357235 MAP3K5Q99683 1374 aa9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 LTKP29376 864 aa9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 ST3GAL1Q11201 340 aa9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 NAA30Q147X3 362 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 TPD52L1Q16890 204 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 BEND3Q5T5X7 828 aa9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 EDC3Q96F86 508 aaKnown RBP9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 MRVI1Q9Y6F6 885 aa9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE1-201ENST00000357235 CCDC171Q6TFL3 1326 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 A0A087WWV3 80 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 BTBD11A6QL63 1104 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 H3BQV1 296 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 IFFO2Q5TF58 517 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 LRRC2Q9BYS8 371 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 CBX8Q9HC52 389 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
CDC42SE1-201ENST00000357235 TNNT1P13805 278 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 PSEN1P49768 467 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZNF165P49910 485 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 G3BP1Q13283 466 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 NPHP1O15259 732 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 NR1I2O75469 434 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 TLR7Q9NYK1 1049 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 CLIP2Q9UDT6 1046 aa9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 V9GYY5 206 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-201ENST00000357235 A0A0D9SFI3 127 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 JAK2O60674 1132 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 TPM3P06753 285 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms