RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 USP21Q9UK80 565 aa16.98■□□□□ 0.31
LSS-201ENST00000356396 SALL3Q9BXA9 1300 aa16.98■□□□□ 0.31
LSS-201ENST00000356396 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
LSS-201ENST00000356396 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
LSS-201ENST00000356396 ALDH1L1O75891 902 aa16.97■□□□□ 0.31
LSS-201ENST00000356396 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
LSS-201ENST00000356396 DBNLQ9UJU6 430 aaKnown RBP16.97■□□□□ 0.31
LSS-201ENST00000356396 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
LSS-201ENST00000356396 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
LSS-201ENST00000356396 DZIP3Q86Y13 1208 aaKnown RBP16.96■□□□□ 0.31
LSS-201ENST00000356396 ADORA1P30542 326 aa16.96■□□□□ 0.31
LSS-201ENST00000356396 PTH1RQ03431 593 aa16.96■□□□□ 0.31
LSS-201ENST00000356396 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
LSS-201ENST00000356396 NEK4P51957 841 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 FOXO4P98177 505 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
LSS-201ENST00000356396 ANTXR1Q9H6X2 564 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 TRMT112Q9UI30 125 aaKnown RBP16.95■□□□□ 0.3
LSS-201ENST00000356396 LTBP4Q8N2S1 1624 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
LSS-201ENST00000356396 SRP68Q9UHB9 627 aaKnown RBP16.95■□□□□ 0.3
LSS-201ENST00000356396 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 TAF5LO75529 589 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 SIK1P57059 783 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 GREM2Q9H772 168 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
LSS-201ENST00000356396 BECN1Q14457 450 aa16.94■□□□□ 0.3
LSS-201ENST00000356396 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
LSS-201ENST00000356396 STARD3NLO95772 234 aa16.94■□□□□ 0.3
LSS-201ENST00000356396 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
LSS-201ENST00000356396 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
LSS-201ENST00000356396 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
LSS-201ENST00000356396 ERC2O15083 957 aa16.93■□□□□ 0.3
LSS-201ENST00000356396 RFX5P48382 616 aaPredicted RBP16.93■□□□□ 0.3
LSS-201ENST00000356396 CASP7P55210 303 aa16.93■□□□□ 0.3
LSS-201ENST00000356396 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
LSS-201ENST00000356396 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
LSS-201ENST00000356396 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
LSS-201ENST00000356396 KIF6Q6ZMV9 814 aa16.92■□□□□ 0.3
LSS-201ENST00000356396 A0A0D9SFI3 127 aa16.92■□□□□ 0.3
LSS-201ENST00000356396 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
LSS-201ENST00000356396 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
LSS-201ENST00000356396 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
LSS-201ENST00000356396 SIPA1L3O60292 1781 aaPredicted RBP16.92■□□□□ 0.3
LSS-201ENST00000356396 DEKP35659 375 aaKnown RBP16.92■□□□□ 0.3
LSS-201ENST00000356396 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 GOLIM4O00461 696 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 SCARF1Q14162 830 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 ECHDC1Q9NTX5 307 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
LSS-201ENST00000356396 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
LSS-201ENST00000356396 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
LSS-201ENST00000356396 TCIRG1Q13488 830 aa16.9■□□□□ 0.3
LSS-201ENST00000356396 RBM25P49756 843 aaKnown RBP16.9■□□□□ 0.3
LSS-201ENST00000356396 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
LSS-201ENST00000356396 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
LSS-201ENST00000356396 SUSD4Q5VX71 490 aa16.89■□□□□ 0.3
LSS-201ENST00000356396 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.3
LSS-201ENST00000356396 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.3
LSS-201ENST00000356396 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.3
LSS-201ENST00000356396 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 ATG9AQ7Z3C6 839 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 BCL9O00512 1426 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 H7C1W4 665 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 KCNJ4P48050 445 aa16.89■□□□□ 0.29
LSS-201ENST00000356396 INTS5Q6P9B9 1019 aaKnown RBP16.89■□□□□ 0.29
LSS-201ENST00000356396 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
LSS-201ENST00000356396 NIP7Q9Y221 180 aaKnown RBP eCLIP16.88■□□□□ 0.29
LSS-201ENST00000356396 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
LSS-201ENST00000356396 SSFA2P28290 1259 aa16.88■□□□□ 0.29
LSS-201ENST00000356396 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
LSS-201ENST00000356396 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 KDM4AO75164 1064 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 ITGA6P23229 1130 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 AFF2P51816 1311 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
LSS-201ENST00000356396 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 CHST3Q7LGC8 479 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 LDHAL6AQ6ZMR3 332 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 MTX1Q13505 466 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
LSS-201ENST00000356396 MAP3K15Q6ZN16 1313 aa16.85■□□□□ 0.29
LSS-201ENST00000356396 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
LSS-201ENST00000356396 FOSBP53539 338 aa16.85■□□□□ 0.29
LSS-201ENST00000356396 GORABQ5T7V8 394 aa16.85■□□□□ 0.29
LSS-201ENST00000356396 GIGYF2Q6Y7W6 1299 aaKnown RBP16.85■□□□□ 0.29
LSS-201ENST00000356396 RAB11FIP4Q86YS3 637 aa16.85■□□□□ 0.29
LSS-201ENST00000356396 GLI3P10071 1580 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms