RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.38
URB2-201ENST00000258243 EYA3Q99504 573 aa12.65□□□□□ -0.38
URB2-201ENST00000258243 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
URB2-201ENST00000258243 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
URB2-201ENST00000258243 BAG6P46379 1132 aa12.65□□□□□ -0.38
URB2-201ENST00000258243 RBM17Q96I25 401 aaKnown RBP12.65□□□□□ -0.38
URB2-201ENST00000258243 CFAP43Q8NDM7 1665 aa12.65□□□□□ -0.38
URB2-201ENST00000258243 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.39
URB2-201ENST00000258243 CCDC112Q8NEF3 446 aa12.65□□□□□ -0.39
URB2-201ENST00000258243 GOLIM4O00461 696 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 TRIM21P19474 475 aaKnown RBP12.64□□□□□ -0.39
URB2-201ENST00000258243 GRM1Q13255 1194 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 PRPF40BQ6NWY9 871 aaKnown RBP12.64□□□□□ -0.39
URB2-201ENST00000258243 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 TMEM2Q9UHN6 1383 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 CCDC192P0DO97 292 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
URB2-201ENST00000258243 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 SYCE3A1L190 88 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
URB2-201ENST00000258243 PDIA4P13667 645 aaKnown RBP12.63□□□□□ -0.39
URB2-201ENST00000258243 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
URB2-201ENST00000258243 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 ALDH1L1O75891 902 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 KRT85P78386 507 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 KSR2Q6VAB6 950 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 SNRKQ9NRH2 765 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 F8W031 263 aaPredicted RBP12.63□□□□□ -0.39
URB2-201ENST00000258243 SEPT6Q14141 434 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 DNAI2Q9GZS0 605 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 WWC3Q9ULE0 1092 aa12.63□□□□□ -0.39
URB2-201ENST00000258243 IFIT3O14879 490 aaKnown RBP12.62□□□□□ -0.39
URB2-201ENST00000258243 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
URB2-201ENST00000258243 BRPF1P55201 1214 aaPredicted RBP12.62□□□□□ -0.39
URB2-201ENST00000258243 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 CEP57L1Q8IYX8 460 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 EYA1Q99502 592 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 SMC2O95347 1197 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 TNPO1Q92973 898 aaKnown RBP12.62□□□□□ -0.39
URB2-201ENST00000258243 CFAP45Q9UL16 551 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 TSPY2A6NKD2 308 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 PDCL2Q8N4E4 241 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 ANKRD2Q9GZV1 360 aa12.62□□□□□ -0.39
URB2-201ENST00000258243 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
URB2-201ENST00000258243 ATP2B3Q16720 1220 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 APBA3O96018 575 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 TRIM27P14373 513 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 A0A1W2PP64 1363 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 KIF5BP33176 963 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
URB2-201ENST00000258243 DNMT1P26358 1616 aaKnown RBP12.61□□□□□ -0.39
URB2-201ENST00000258243 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
URB2-201ENST00000258243 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 GRM8O00222 908 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 IRS4O14654 1257 aaPredicted RBP12.6□□□□□ -0.39
URB2-201ENST00000258243 CCP110O43303 1012 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 SUDS3Q9H7L9 328 aaPredicted RBP12.6□□□□□ -0.39
URB2-201ENST00000258243 GOLGA8AA7E2F4 631 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 GOLGA8BA8MQT2 603 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
URB2-201ENST00000258243 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 VEZTQ9HBM0 779 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 ZNHIT6Q9NWK9 470 aaKnown RBP12.6□□□□□ -0.39
URB2-201ENST00000258243 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
URB2-201ENST00000258243 CYP7A1P22680 504 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 SSFA2P28290 1259 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 CLCN1P35523 988 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
URB2-201ENST00000258243 RBM26Q5T8P6 1007 aaKnown RBP12.59□□□□□ -0.39
URB2-201ENST00000258243 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
URB2-201ENST00000258243 CBX1P83916 185 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 TMEM266Q2M3C6 531 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 TNMDQ9H2S6 317 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
URB2-201ENST00000258243 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
URB2-201ENST00000258243 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 DESP17661 470 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 SLC4A8Q2Y0W8 1093 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
URB2-201ENST00000258243 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.39
URB2-201ENST00000258243 NLRP5P59047 1200 aa12.58□□□□□ -0.39
URB2-201ENST00000258243 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.39
URB2-201ENST00000258243 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.39
URB2-201ENST00000258243 RIMBP2O15034 1052 aa12.58□□□□□ -0.4
URB2-201ENST00000258243 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms