RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 GJD4Q96KN9 370 aaPredicted RBP19.53■□□□□ 0.72
ITGA4-201ENST00000233573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.53■□□□□ 0.72
ITGA4-201ENST00000233573 STARD3NLO95772 234 aa19.52■□□□□ 0.72
ITGA4-201ENST00000233573 CYP19A1P11511 503 aaPredicted RBP19.52■□□□□ 0.72
ITGA4-201ENST00000233573 SPRYD3Q8NCJ5 442 aa19.52■□□□□ 0.72
ITGA4-201ENST00000233573 TEX13AQ9BXU3 409 aaPredicted RBP19.52■□□□□ 0.72
ITGA4-201ENST00000233573 FRAT2O75474 233 aaPredicted RBP19.52■□□□□ 0.71
ITGA4-201ENST00000233573 RFX5P48382 616 aaPredicted RBP19.52■□□□□ 0.71
ITGA4-201ENST00000233573 PTF1AQ7RTS3 328 aa19.52■□□□□ 0.71
ITGA4-201ENST00000233573 UBE3BQ7Z3V4 1068 aa19.52■□□□□ 0.71
ITGA4-201ENST00000233573 ATRNO75882 1429 aa19.51■□□□□ 0.71
ITGA4-201ENST00000233573 A0A087WZG4 1122 aa19.5■□□□□ 0.71
ITGA4-201ENST00000233573 H7C1W4 665 aa19.5■□□□□ 0.71
ITGA4-201ENST00000233573 COPRSQ9NQ92 184 aa19.5■□□□□ 0.71
ITGA4-201ENST00000233573 ZBTB1Q9Y2K1 713 aa19.5■□□□□ 0.71
ITGA4-201ENST00000233573 G3BP1Q13283 466 aaKnown RBP eCLIP19.5■□□□□ 0.71
ITGA4-201ENST00000233573 PALLDQ8WX93 1383 aa19.49■□□□□ 0.71
ITGA4-201ENST00000233573 K7ELQ4 463 aaPredicted RBP19.49■□□□□ 0.71
ITGA4-201ENST00000233573 GLRX3O76003 335 aaKnown RBP19.49■□□□□ 0.71
ITGA4-201ENST00000233573 ECHDC1Q9NTX5 307 aa19.49■□□□□ 0.71
ITGA4-201ENST00000233573 KLHDC4Q8TBB5 520 aa19.48■□□□□ 0.71
ITGA4-201ENST00000233573 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
ITGA4-201ENST00000233573 IL25Q9H293 177 aa19.48■□□□□ 0.71
ITGA4-201ENST00000233573 LOC102724428A0A0B4J2F2 783 aa19.48■□□□□ 0.71
ITGA4-201ENST00000233573 SIK1P57059 783 aa19.48■□□□□ 0.71
ITGA4-201ENST00000233573 ARXQ96QS3 562 aa19.48■□□□□ 0.71
ITGA4-201ENST00000233573 CHMP5Q9NZZ3 219 aa19.48■□□□□ 0.71
ITGA4-201ENST00000233573 MAP4K4O95819 1239 aaPredicted RBP19.47■□□□□ 0.71
ITGA4-201ENST00000233573 ATP6V1AP38606 617 aa19.47■□□□□ 0.71
ITGA4-201ENST00000233573 PTPN12Q05209 780 aaKnown RBP19.47■□□□□ 0.71
ITGA4-201ENST00000233573 AACSQ86V21 672 aa19.47■□□□□ 0.71
ITGA4-201ENST00000233573 IL17RAQ96F46 866 aa19.47■□□□□ 0.71
ITGA4-201ENST00000233573 TRPC5Q9UL62 973 aaPredicted RBP19.47■□□□□ 0.71
ITGA4-201ENST00000233573 EPB41L2O43491 1005 aaKnown RBP19.47■□□□□ 0.71
ITGA4-201ENST00000233573 IFIT2P09913 472 aaKnown RBP19.47■□□□□ 0.71
ITGA4-201ENST00000233573 FOXO4P98177 505 aa19.47■□□□□ 0.71
ITGA4-201ENST00000233573 ITPK1Q13572 414 aa19.47■□□□□ 0.71
ITGA4-201ENST00000233573 CNTROBQ8N137 903 aa19.47■□□□□ 0.71
ITGA4-201ENST00000233573 CWC25Q9NXE8 425 aaPredicted RBP19.47■□□□□ 0.71
ITGA4-201ENST00000233573 SIL1Q9H173 461 aa19.46■□□□□ 0.71
ITGA4-201ENST00000233573 EP400Q96L91 3159 aa19.46■□□□□ 0.71
ITGA4-201ENST00000233573 CCDC191Q8NCU4 936 aa19.45■□□□□ 0.7
ITGA4-201ENST00000233573 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
ITGA4-201ENST00000233573 QTRT2Q9H974 415 aaKnown RBP19.45■□□□□ 0.7
ITGA4-201ENST00000233573 KCNQ4P56696 695 aa19.44■□□□□ 0.7
ITGA4-201ENST00000233573 KIF6Q6ZMV9 814 aa19.44■□□□□ 0.7
ITGA4-201ENST00000233573 GPATCH3Q96I76 525 aa19.44■□□□□ 0.7
ITGA4-201ENST00000233573 SGSM2O43147 1006 aa19.44■□□□□ 0.7
ITGA4-201ENST00000233573 SEPT12Q8IYM1 358 aa19.44■□□□□ 0.7
ITGA4-201ENST00000233573 TLR7Q9NYK1 1049 aaKnown RBP19.44■□□□□ 0.7
ITGA4-201ENST00000233573 BTAF1O14981 1849 aa19.43■□□□□ 0.7
ITGA4-201ENST00000233573 INTS5Q6P9B9 1019 aaKnown RBP19.43■□□□□ 0.7
ITGA4-201ENST00000233573 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
ITGA4-201ENST00000233573 CCDC8Q9H0W5 538 aaPredicted RBP19.43■□□□□ 0.7
ITGA4-201ENST00000233573 ANO2Q9NQ90 1003 aa19.43■□□□□ 0.7
ITGA4-201ENST00000233573 CRKLP46109 303 aaKnown RBP19.42■□□□□ 0.7
ITGA4-201ENST00000233573 ANAPC15P60006 121 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 TCIRG1Q13488 830 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 HLFQ16534 295 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 CIZ1Q9ULV3 898 aaPredicted RBP19.42■□□□□ 0.7
ITGA4-201ENST00000233573 NHSQ6T4R5 1651 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 DEKP35659 375 aaKnown RBP19.42■□□□□ 0.7
ITGA4-201ENST00000233573 TRIM28Q13263 835 aaKnown RBP19.42■□□□□ 0.7
ITGA4-201ENST00000233573 SMARCC1Q92922 1105 aaPredicted RBP19.42■□□□□ 0.7
ITGA4-201ENST00000233573 PALD1Q9ULE6 856 aa19.42■□□□□ 0.7
ITGA4-201ENST00000233573 ONECUT3O60422 494 aaPredicted RBP19.41■□□□□ 0.7
ITGA4-201ENST00000233573 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
ITGA4-201ENST00000233573 TBC1D2BQ9UPU7 963 aa19.41■□□□□ 0.7
ITGA4-201ENST00000233573 CICQ96RK0 1608 aaPredicted RBP19.41■□□□□ 0.7
ITGA4-201ENST00000233573 EVI5LQ96CN4 794 aa19.4■□□□□ 0.7
ITGA4-201ENST00000233573 COL5A3P25940 1745 aaPredicted RBP19.4■□□□□ 0.7
ITGA4-201ENST00000233573 IL6STP40189 918 aaPredicted RBP19.4■□□□□ 0.7
ITGA4-201ENST00000233573 SBF2Q86WG5 1849 aa19.39■□□□□ 0.7
ITGA4-201ENST00000233573 RAD50Q92878 1312 aa19.39■□□□□ 0.7
ITGA4-201ENST00000233573 ST18O60284 1047 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 MCCP23508 829 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 HSPA4P34932 840 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 LSG1Q9H089 658 aaKnown RBP19.39■□□□□ 0.69
ITGA4-201ENST00000233573 RREB1Q92766 1687 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 GPTP24298 496 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 TFCP2Q12800 502 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 TNNI3KQ59H18 835 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 DZIP3Q86Y13 1208 aaKnown RBP19.39■□□□□ 0.69
ITGA4-201ENST00000233573 FPGT-TNNI3KV9GXZ4 949 aa19.39■□□□□ 0.69
ITGA4-201ENST00000233573 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
ITGA4-201ENST00000233573 GIGYF2Q6Y7W6 1299 aaKnown RBP19.38■□□□□ 0.69
ITGA4-201ENST00000233573 LINC00116Q8NCU8 138 aa19.38■□□□□ 0.69
ITGA4-201ENST00000233573 NUP98P52948 1817 aa19.38■□□□□ 0.69
ITGA4-201ENST00000233573 EIF5P55010 431 aaKnown RBP19.37■□□□□ 0.69
ITGA4-201ENST00000233573 ATG9AQ7Z3C6 839 aa19.37■□□□□ 0.69
ITGA4-201ENST00000233573 DBNLQ9UJU6 430 aaKnown RBP19.37■□□□□ 0.69
ITGA4-201ENST00000233573 BRWD3Q6RI45 1802 aa19.37■□□□□ 0.69
ITGA4-201ENST00000233573 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
ITGA4-201ENST00000233573 RAB3GAP1Q15042 981 aa19.36■□□□□ 0.69
ITGA4-201ENST00000233573 DIAPH3Q9NSV4 1193 aa19.36■□□□□ 0.69
ITGA4-201ENST00000233573 ZNF831Q5JPB2 1677 aa19.35■□□□□ 0.69
ITGA4-201ENST00000233573 PCCAP05165 728 aaPredicted RBP19.35■□□□□ 0.69
ITGA4-201ENST00000233573 HSP90AA1P07900 732 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms