RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 AACSQ86V21 672 aa17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 SYTL4Q96C24 671 aaPredicted RBP17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 ANTXR1Q9H6X2 564 aa17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 IL6STP40189 918 aaPredicted RBP17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 JARID2Q92833 1246 aaPredicted RBP17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 EAF2Q96CJ1 260 aaPredicted RBP17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 PLA2G12BQ9BX93 195 aa17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 ERVV-1B6SEH8 477 aa17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 IL17RAQ96F46 866 aa17.47■□□□□ 0.39
RTFDC1-201ENST00000023939 NGLY1Q96IV0 654 aa17.46■□□□□ 0.39
RTFDC1-201ENST00000023939 RREB1Q92766 1687 aa17.46■□□□□ 0.39
RTFDC1-201ENST00000023939 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
RTFDC1-201ENST00000023939 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
RTFDC1-201ENST00000023939 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
RTFDC1-201ENST00000023939 SIL1Q9H173 461 aa17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 C8orf37Q96NL8 207 aa17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
RTFDC1-201ENST00000023939 CIAO1O76071 339 aa17.43■□□□□ 0.38
RTFDC1-201ENST00000023939 ANAPC15P60006 121 aa17.43■□□□□ 0.38
RTFDC1-201ENST00000023939 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
RTFDC1-201ENST00000023939 FBXO3Q9UK99 471 aa17.43■□□□□ 0.38
RTFDC1-201ENST00000023939 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 SGSM2O43147 1006 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 EIF5P55010 431 aaKnown RBP17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 SIK1P57059 783 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 INTS5Q6P9B9 1019 aaKnown RBP17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 CCDC87Q9NVE4 849 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
RTFDC1-201ENST00000023939 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 NLRP10Q86W26 655 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 CCDC8Q9H0W5 538 aaPredicted RBP17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 PALLDQ8WX93 1383 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 CSF1RP07333 972 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 MCCP23508 829 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 TFCP2Q12800 502 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 NBR1Q14596 966 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 HLFQ16534 295 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
RTFDC1-201ENST00000023939 ATP5JP18859 108 aa17.4■□□□□ 0.38
RTFDC1-201ENST00000023939 DZIP3Q86Y13 1208 aaKnown RBP17.4■□□□□ 0.38
RTFDC1-201ENST00000023939 RUFY2Q8WXA3 655 aa17.4■□□□□ 0.38
RTFDC1-201ENST00000023939 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
RTFDC1-201ENST00000023939 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
RTFDC1-201ENST00000023939 EYA2O00167 538 aa17.39■□□□□ 0.37
RTFDC1-201ENST00000023939 HIP1O00291 1037 aa17.39■□□□□ 0.37
RTFDC1-201ENST00000023939 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
RTFDC1-201ENST00000023939 DDIT3P35638 169 aa17.39■□□□□ 0.37
RTFDC1-201ENST00000023939 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
RTFDC1-201ENST00000023939 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.37
RTFDC1-201ENST00000023939 CD2BP2O95400 341 aaKnown RBP17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 CRKLP46109 303 aaKnown RBP17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 SNRKQ9NRH2 765 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 USP21Q9UK80 565 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 ITPK1Q13572 414 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
RTFDC1-201ENST00000023939 RFX7Q2KHR2 1363 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 TICAM2Q86XR7 235 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 IL25Q9H293 177 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 CIZ1Q9ULV3 898 aaPredicted RBP17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 RAD50Q92878 1312 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 NUP98P52948 1817 aa17.37■□□□□ 0.37
RTFDC1-201ENST00000023939 ST18O60284 1047 aa17.36■□□□□ 0.37
RTFDC1-201ENST00000023939 HSPA4P34932 840 aa17.36■□□□□ 0.37
RTFDC1-201ENST00000023939 CCDC57Q2TAC2 916 aa17.36■□□□□ 0.37
RTFDC1-201ENST00000023939 AK7Q96M32 723 aa17.36■□□□□ 0.37
RTFDC1-201ENST00000023939 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
RTFDC1-201ENST00000023939 COL5A3P25940 1745 aaPredicted RBP17.36■□□□□ 0.37
RTFDC1-201ENST00000023939 RGL2O15211 777 aa17.35■□□□□ 0.37
RTFDC1-201ENST00000023939 KCNQ2O43526 872 aa17.35■□□□□ 0.37
RTFDC1-201ENST00000023939 MYT1Q01538 1121 aa17.35■□□□□ 0.37
RTFDC1-201ENST00000023939 ARXQ96QS3 562 aa17.35■□□□□ 0.37
RTFDC1-201ENST00000023939 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
RTFDC1-201ENST00000023939 ZNF609O15014 1411 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms