RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ZFP90Q8TF47 636 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 MRPS27Q92552 414 aaKnown RBP-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 SECISBP2LQ93073 1101 aaKnown RBP-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 L3HYPDHQ96EM0 354 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 SLC39A13Q96H72 371 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 LRRC3BQ96PB8 259 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 ZNF559Q9BR84 538 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 ZNF416Q9BWM5 594 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 SLCO1C1Q9NYB5 712 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 SPRR3Q9UBC9 169 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 TRAPPC4Q9Y296 219 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 L3MBTL1Q9Y468 752 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 LRRFIP2Q9Y608 721 aaKnown RBP-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 NAV2Q8IVL1 2488 aa-0.69□□□□□ -2.52
LMBR1-222ENST00000638959 COL7A1Q02388 2944 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 E7EQL1 145 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 K7ENP7 123 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 FLRT2O43155 660 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 SCRG1O75711 98 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 CCNKO75909 580 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 PGK2P07205 417 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 TLX1NBP0CAT3 122 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 LYNX1P0DP58 116 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 SPP1P10451 314 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 TCP1P17987 556 aaKnown RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 RPL29P47914 159 aaKnown RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 WASHC5Q12768 1159 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 CDC20Q12834 499 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 TCHHL1Q5QJ38 904 aaPredicted RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 GPR142Q7Z601 462 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 TSEN54Q7Z6J9 526 aaKnown RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 TC2NQ8N9U0 490 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 ZNF680Q8NEM1 530 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 NPBQ8NG41 125 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 OR52J3Q8NH60 311 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 KLF14Q8TD94 323 aaPredicted RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 PRPF31Q8WWY3 499 aaKnown RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 IL1F10Q8WWZ1 152 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 DNAJA3Q96EY1 480 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 C11orf24Q96F05 449 aaPredicted RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 SCLT1Q96NL6 688 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 TEX12Q9BXU0 123 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 MAGT1Q9H0U3 335 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 PLGRKTQ9HBL7 147 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 PNPLA3Q9NST1 481 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 AIG1Q9NVV5 245 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 SLC25A37Q9NYZ2 338 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 VPS54Q9P1Q0 977 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 DYNC1LI1Q9Y6G9 523 aaKnown RBP-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 CACNA1GO43497 2377 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 MED13Q9UHV7 2174 aa-0.7□□□□□ -2.52
LMBR1-222ENST00000638959 NPIPA5A0A0B4J1W7 369 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 TRBV7-9A0A0J9YWB2 115 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 ATP6AP2A0A1C7CYW4 349 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 SH3PXD2BA1X283 911 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 ANKDD1BA6NHY2 528 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 NPIPA5E9PKD4 350 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 EPB41L2O43491 1005 aaKnown RBP-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 RANBP6O60518 1105 aaKnown RBP-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 FCER2P06734 321 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 TKTL1P51854 596 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 LIM2P55344 173 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 FKBP1BP68106 108 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 OR1C1Q15619 314 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 HAGHQ16775 308 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 RSPO1Q2MKA7 263 aaPredicted RBP-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 HAUS3Q68CZ6 603 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 CYP4V2Q6ZWL3 525 aaPredicted RBP-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 LGI3Q8N145 548 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 SIX6OS1Q8N1H7 587 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 NECAP1Q8NC96 275 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 CCNYQ8ND76 341 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 BLNKQ8WV28 456 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 RAD54LQ92698 747 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 ABHD1Q96SE0 405 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 RNF5Q99942 180 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 CCDC106Q9BWC9 280 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 SGK2Q9HBY8 427 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 NRN1Q9NPD7 142 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 MEPEQ9NQ76 525 aaPredicted RBP-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 GIMAP4Q9NUV9 329 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 EHFQ9NZC4 300 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 GIMAP2Q9UG22 337 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 TUBGCP4Q9UGJ1 667 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 SIGLEC9Q9Y336 463 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 NACADO15069 1562 aa-0.71□□□□□ -2.52
LMBR1-222ENST00000638959 A0A0B4J203 849 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 A0A0G2JN53 185 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 SDHAF1A6NFY7 115 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 M0R296 226 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 AHCYL1O43865 530 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 CD5LO43866 347 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 PEX14O75381 377 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 GSTA2P09210 222 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 OR1D2P34982 312 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 STARP49675 285 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 GDI2P50395 445 aaKnown RBP-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 MRPS11P82912 194 aaKnown RBP-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 CDKL1Q00532 357 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms