RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PEAK1Q9H792 1746 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 A0A0A6YYH2 397 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR2A25A4D2G3 310 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 A6NJ64 397 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CCKBRP32239 447 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CCR7P32248 378 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 RPS13P62277 151 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 PAQR3Q6TCH7 311 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 NAXDQ8IW45 347 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 RBP7Q96R05 134 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 SLC35E2BP0CK96 405 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ZNF30P17039 623 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CTRB1P17538 263 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 SLC14A2Q15849 920 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ZNF74Q16587 644 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TMEM35AQ53FP2 167 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CTRB2Q6GPI1 263 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TMEM135Q86UB9 458 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 THOC6Q86W42 341 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 ADPRHL1Q8NDY3 354 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TMEM43Q9BTV4 400 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 NDOR1Q9UHB4 597 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 DRD5P21918 477 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ACTR1BP42025 376 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 HTR4Q13639 388 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CPZQ66K79 652 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CNKSR3Q6P9H4 555 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TEX261Q6UWH6 196 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 DBX2Q6ZNG2 339 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 C15orf54Q8N8G6 183 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TMEM145Q8NBT3 493 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 WWTR1Q9GZV5 400 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 BPIFA1Q9NP55 256 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ZNF701Q9NV72 531 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 ASB6Q9NWX5 421 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TRAPPC4Q9Y296 219 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 U3KQ87 197 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 DIDO1Q9BTC0 2240 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 FOXD2O60548 495 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 CD1DP15813 335 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 NT5EP21589 574 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 FABP6P51161 128 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CAV2P51636 162 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CARD16Q5EG05 197 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CLEC10AQ8IUN9 316 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR4K1Q8NGD4 311 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ASB17Q8WXJ9 295 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ZNF582Q96NG8 517 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR8D2Q9GZM6 311 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 Q9N2J8 555 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 PCDHA2Q9Y5H9 948 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 NALCNQ8IZF0 1738 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR1F1O43749 312 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 TBL1XO60907 577 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ALDH2P05091 517 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CX3CR1P49238 355 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 PRAMEF14Q5SWL7 426 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR4F3Q6IEY1 312 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 APOBEC3HQ6NTF7 200 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 UNQ6126/PRO20091Q6UXV3 157 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 C11orf54Q9H0W9 315 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 SLC22A7Q9Y694 548 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 PRKACGP22612 351 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 GZMKP49863 264 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 MSMO1Q15800 293 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ALKAL2Q6UX46 152 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 APOOLQ6UXV4 268 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 ANKK1Q8NFD2 765 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR56B1Q8NGI3 324 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 POT1Q9NUX5 634 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CIDEAO60543 219 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 FZD7O75084 574 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CTSHP09668 335 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 RNF144AP50876 292 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 LILRB1Q8NHL6 650 aaPredicted RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 THSD1Q9NS62 852 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 DUS2Q9NX74 493 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 K7ERU9 68 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 GSRP00390 522 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 RAB6AP20340 208 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 EDNRBP24530 442 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 OR10A3P58181 314 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 MANEALQ5VSG8 457 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 SHFQ7M4L6 423 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 FAM58AQ8N1B3 248 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 MR1Q95460 341 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 SLC25A36Q96CQ1 311 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 CMKLR1Q99788 373 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 C5P01031 1676 aa8.32□□□□□ -1.08
TTC28-208ENST00000612946 RIMS1Q86UR5 1692 aaKnown RBP8.32□□□□□ -1.08
TTC28-208ENST00000612946 ARGFXA6NJG6 315 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 STK17BO94768 372 aa8.31□□□□□ -1.08
TTC28-208ENST00000612946 POU6F2P78424 691 aaPredicted RBP8.31□□□□□ -1.08
TTC28-208ENST00000612946 SLBPQ14493 270 aaKnown RBP eCLIP8.31□□□□□ -1.08
TTC28-208ENST00000612946 NCBP2-AS2Q69YL0 99 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms