RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DTNBP1Q96EV8 351 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 GPR137Q96N19 417 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 CCDC106Q9BWC9 280 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 TBL1XR1Q9BZK7 514 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 ZNF350Q9GZX5 532 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 SAP130Q9H0E3 1048 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 UBQLN3Q9H347 655 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 GALNT9Q9HCQ5 603 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 FLRT3Q9NZU0 649 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
RNF40-212ENST00000602784 IGLV3-32A0A0A0MS00 114 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 A0A1W2PQD3 144 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 EVPLLA8MZ36 301 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 NPIPA5E9PKD4 350 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 CBR3O75828 277 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 OXSR1O95747 527 aaPredicted RBP12.67□□□□□ -0.38
RNF40-212ENST00000602784 HPGDP15428 266 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 GPX2P18283 190 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 ENDOUP21128 410 aaKnown RBP12.67□□□□□ -0.38
RNF40-212ENST00000602784 CRATP43155 626 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 C17orf67Q0P5P2 114 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 GNA13Q14344 377 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 SLC10A1Q14973 349 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 IGFBP7Q16270 282 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 FLYWCH1Q4VC44 716 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 KLHL26Q53HC5 615 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 RUNDC3AQ59EK9 446 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 APOOLQ6UXV4 268 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 DHDDSQ86SQ9 333 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 GALNT10Q86SR1 603 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 SNX32Q86XE0 403 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 PLCZ1Q86YW0 608 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 MISPQ8IVT2 679 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
RNF40-212ENST00000602784 GNRHR2Q96P88 292 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 CGREF1Q99674 301 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 ZNF703Q9H7S9 590 aaPredicted RBP12.67□□□□□ -0.38
RNF40-212ENST00000602784 ACKR4Q9NPB9 350 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 SEC14L3Q9UDX4 400 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.67□□□□□ -0.38
RNF40-212ENST00000602784 NPIPA1Q9UND3 350 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 C15orf41Q9Y2V0 281 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 MRPS18CQ9Y3D5 142 aaKnown RBP12.67□□□□□ -0.38
RNF40-212ENST00000602784 SVILO95425 2214 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 POLEQ07864 2286 aa12.67□□□□□ -0.38
RNF40-212ENST00000602784 LOC100653049A0A140TA62 436 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 FAM166BA8MTA8 275 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 SCDO00767 359 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 NDUFB5O43674 189 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 KIAA0513O60268 411 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 SUSD5O60279 629 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 FCMRO60667 390 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 TNFRSF21O75509 655 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 KRT34O76011 436 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 IGHG3P01860 377 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 NR2F1P10589 423 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 ETFAP13804 333 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 DCTP40126 519 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 MAGEA5P43359 124 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 DSTNP60981 165 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 FUT5Q11128 374 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 NFYCQ13952 458 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 ZNF141Q15928 474 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
RNF40-212ENST00000602784 TRMT5Q32P41 509 aaKnown RBP12.66□□□□□ -0.38
RNF40-212ENST00000602784 MMEL1Q495T6 779 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 GKAP1Q5VSY0 366 aaPredicted RBP12.66□□□□□ -0.38
RNF40-212ENST00000602784 GFRALQ6UXV0 394 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 LRRC74BQ6ZQY2 392 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 MTERF4Q7Z6M4 381 aaKnown RBP12.66□□□□□ -0.38
RNF40-212ENST00000602784 MARCH3Q86UD3 253 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 GHDCQ8N2G8 530 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 METTL25Q8N6Q8 603 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 PCYOX1LQ8NBM8 494 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 DUSP19Q8WTR2 217 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 ANKRD27Q96NW4 1050 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
RNF40-212ENST00000602784 MTHFD2LQ9H903 347 aaPredicted RBP12.66□□□□□ -0.38
RNF40-212ENST00000602784 CALML5Q9NZT1 146 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 PPP4R1LQ9P1A2 415 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 P2RX2Q9UBL9 471 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 WDR45Q9Y484 360 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 DTNAQ9Y4J8 743 aa12.66□□□□□ -0.38
RNF40-212ENST00000602784 HELZ2Q9BYK8 2649 aaKnown RBP12.66□□□□□ -0.38
RNF40-212ENST00000602784 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.38
RNF40-212ENST00000602784 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 TMEM247A6NEH6 219 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 H3BNH8 94 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 J3QKU1 62 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 GNB5O14775 395 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 MRASO14807 208 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 SCO2O43819 266 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms