RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ACSM2BQ68CK6 577 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 TMEM107Q6UX40 140 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 GPRIN3Q6ZVF9 776 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 OR2L13Q8N349 312 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 OR10D3Q8NH80 312 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.91□□□□□ -0.98
LIG1-209ENST00000596104 RAB3IL1Q8TBN0 382 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 BBS4Q96RK4 519 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 ZNF382Q96SR6 550 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 NPAS1Q99742 590 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 LMF2Q9BU23 707 aaKnown RBP8.91□□□□□ -0.98
LIG1-209ENST00000596104 EBPLQ9BY08 206 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 REG4Q9BYZ8 158 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 Q9N2J8 555 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 SIRT5Q9NXA8 310 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 SENP1Q9P0U3 644 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 PYCARDQ9ULZ3 195 aa8.91□□□□□ -0.98
LIG1-209ENST00000596104 ADAMDEC1O15204 470 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 CXCL13O43927 109 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 ULK1O75385 1050 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 SLITRK5O94991 958 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 UTS2O95399 124 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 ANGPTL1O95841 491 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 PLGP00747 810 aaPredicted RBP8.9□□□□□ -0.98
LIG1-209ENST00000596104 IGKV1D-16P01601 117 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 INHBAP08476 426 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 PHBP35232 272 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 GSTM5P46439 218 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 SERPINB9P50453 376 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 NCBP2P52298 156 aaKnown RBP eCLIP8.9□□□□□ -0.98
LIG1-209ENST00000596104 GRAMD1BQ3KR37 738 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 ZNF678Q5SXM1 525 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 HMBOX1Q6NT76 420 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 MFSD12Q6NUT3 480 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 DNM1P46Q6ZS02 220 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 BEND4Q6ZU67 534 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 GALNT10Q86SR1 603 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 HIPK1Q86Z02 1210 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 RELL1Q8IUW5 271 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 WDR75Q8IWA0 830 aaKnown RBP8.9□□□□□ -0.98
LIG1-209ENST00000596104 GTPBP8Q8N3Z3 284 aaPredicted RBP8.9□□□□□ -0.98
LIG1-209ENST00000596104 METTL6Q8TCB7 284 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 HOXB13Q92826 284 aaPredicted RBP8.9□□□□□ -0.98
LIG1-209ENST00000596104 ELP4Q96EB1 424 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 TMEM237Q96Q45 408 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 PAFAH2Q99487 392 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 PRRG4Q9BZD6 226 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 TBL1XR1Q9BZK7 514 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 SLCO5A1Q9H2Y9 848 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 GLIPR2Q9H4G4 154 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 GLRX2Q9NS18 164 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 DDX18Q9NVP1 670 aaKnown RBP8.9□□□□□ -0.98
LIG1-209ENST00000596104 PAQR5Q9NXK6 330 aaPredicted RBP8.9□□□□□ -0.98
LIG1-209ENST00000596104 TAS2R7Q9NYW3 318 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 NFU1Q9UMS0 254 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 VDAC3Q9Y277 283 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 RNF115Q9Y4L5 304 aa8.9□□□□□ -0.98
LIG1-209ENST00000596104 A0A087WZY1 265 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 UQCRHLA0A096LP55 91 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 A0A0J9YW62 118 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 GXYLT2A0PJZ3 443 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 SERTM1A2A2V5 107 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 C7orf72A4D263 438 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 TRIM49D1C9J1S8 452 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 ALG1L2C9J202 215 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 TLX2O43763 284 aaPredicted RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 CD5LO43866 347 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 GMFGO60234 142 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 DLX3O60479 287 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 GCM2O75603 506 aaPredicted RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 SUPT7LO94864 414 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 ANXA4P09525 319 aaPredicted RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 IFI6P09912 130 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 HMOX2P30519 316 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 AGTR1P30556 359 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 IDUAP35475 653 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 ACVR1BP36896 505 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 MAP3K8P41279 467 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 RFX3P48380 749 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 CLK3P49761 638 aaKnown RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 PSMD4P55036 377 aaKnown RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 RAC1P63000 192 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 SLC7A5Q01650 507 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 ZNF763Q0D2J5 394 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 C2orf80Q0P641 193 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 NCMAPQ5T1S8 102 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 FAM71E1Q6IPT2 247 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 PPP4R4Q6NUP7 873 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 PODNL1Q6PEZ8 512 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 SEZ6L2Q6UXD5 910 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 DNAJC14Q6Y2X3 702 aaPredicted RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 ZNF572Q7Z3I7 529 aaPredicted RBP8.89□□□□□ -0.99
LIG1-209ENST00000596104 STK32CQ86UX6 486 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 GABRG1Q8N1C3 465 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 STEAP2Q8NFT2 490 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 OR4C3Q8NH37 302 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 OR2V1Q8NHB1 315 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 DCAKDQ8WVC6 231 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
LIG1-209ENST00000596104 S100PBPQ96BU1 408 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms