RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TTYH2Q9BSA4 534 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 HOXD1Q9GZZ0 328 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 PIGUQ9H490 435 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 CXorf36Q9H7Y0 433 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 VIPAS39Q9H9C1 493 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 EXD2Q9NVH0 621 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 GIN1Q9NXP7 522 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 NTMQ9P121 344 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 SPRR3Q9UBC9 169 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 HAO1Q9UJM8 370 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 FBXL2Q9UKC9 423 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 HRH3Q9Y5N1 445 aa5.97□□□□□ -1.45
TRAF4-213ENST00000578917 KLF2Q9Y5W3 355 aaPredicted RBP5.97□□□□□ -1.45
TRAF4-213ENST00000578917 LRBAP50851 2863 aa5.96□□□□□ -1.45
TRAF4-213ENST00000578917 UQCRHLA0A096LP55 91 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 RNF103-CHMP3A0A140T963 221 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 FAM90A27PA6NNH2 459 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 HSPB2A8KAH6 182 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 RNASET2O00584 256 aaKnown RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 POLR3GO15318 223 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 HNRNPRO43390 633 aaKnown RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 HCRTR2O43614 444 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 PSMG1O95456 288 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 AGR2O95994 175 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 IGKV1D-16P01601 117 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 IL6P05231 212 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 GLI4P10075 376 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ACP2P11117 423 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 POU3F2P20265 443 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 TBXA2RP21731 343 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 UQCRC2P22695 453 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 SRD5A2P31213 254 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 DCTP40126 519 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 PTGDSP41222 190 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 STARP49675 285 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ANXA11P50995 505 aaKnown RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF41P51814 821 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 DGKQP52824 942 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 CASP9P55211 416 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 EEFSECP57772 596 aaKnown RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 C21orf58P58505 322 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 STX1BP61266 288 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 RPS26P62854 115 aaKnown RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 LRRC74AQ0VAA2 488 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 HSPB2Q16082 182 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF630Q2M218 657 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 FLYWCH1Q4VC44 716 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 SLC9B1Q4ZJI4 515 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 TTMPQ5BVD1 217 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 SPANXN4Q5MJ08 99 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 DCST2Q5T1A1 773 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF787Q6DD87 383 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 OGFOD2Q6N063 350 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 PPP4R4Q6NUP7 873 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 CDC73Q6P1J9 531 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 CAMKMTQ7Z624 323 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ULK2Q8IYT8 1036 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 UBQLNLQ8IYU4 475 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 CLEC4FQ8N1N0 589 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 MIER2Q8N344 545 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 RPRMLQ8N4K4 120 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 GATSQ8NAP1 163 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 GLB1L3Q8NCI6 653 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 LILRB4Q8NHJ6 448 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 PHOSPHO1Q8TCT1 267 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 SFXN5Q8TD22 340 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 ACTRT2Q8TDY3 377 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 MARVELD3Q96A59 401 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 TESCQ96BS2 214 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 LRRC46Q96FV0 321 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 SH3YL1Q96HL8 342 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-213ENST00000578917 MARK4Q96L34 752 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 STACQ99469 402 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 UGT2B28Q9BY64 529 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 UBQLN3Q9H347 655 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 RMND5AQ9H871 391 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 DUSP22Q9NRW4 184 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 AIG1Q9NVV5 245 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 FLRT3Q9NZU0 649 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 RNF6Q9Y252 685 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 USH1CQ9Y6N9 552 aa5.96□□□□□ -1.46
TRAF4-213ENST00000578917 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 NKX2-6A6NCS4 301 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 CCDC154A6NI56 674 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 C9JVG2 144 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 H3BML4 177 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 LINC01387J3KSC0 135 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 RFXANKO14593 260 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 DVL2O14641 736 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 SEC14L5O43304 696 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 ZIC3O60481 467 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 STX11O75558 287 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 CYP7B1O75881 506 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 TGDSO95455 350 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 OXSR1O95747 527 aaPredicted RBP5.95□□□□□ -1.46
TRAF4-213ENST00000578917 EPPINO95925 133 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 GSNP06396 782 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 PGRP06401 933 aa5.95□□□□□ -1.46
TRAF4-213ENST00000578917 ALDOCP09972 364 aaKnown RBP5.95□□□□□ -1.46
TRAF4-213ENST00000578917 CPN1P15169 458 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms