RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	TEDDM1	Q5T9Z0	273 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	NSUN5P2	Q63ZY6	315 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	TRIM40	Q6P9F5	258 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	PLXDC2	Q6UX71	529 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	ZNF793	Q6ZN11	406 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	LUZP2	Q86TE4	346 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	CNTN4	Q8IWV2	1026 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	OR4N5	Q8IXE1	308 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	ADGRG5	Q8IZF4	528 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	RASGEF1C	Q8N431	466 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	LIX1	Q8N485	282 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	GPATCH11	Q8N954	259 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	NAT8L	Q8N9F0	302 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	TTL	Q8NG68	377 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	OR5L2	Q8NGL0	311 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	NUBPL	Q8TB37	319 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	SLC44A1	Q8WWI5	657 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	PPWD1	Q96BP3	646 aa	Known RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	SPACA9	Q96E40	222 aa	Predicted RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	LRRC46	Q96FV0	321 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	WDYHV1	Q96HA8	205 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	PDLIM5	Q96HC4	596 aa	Known RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	SENP5	Q96HI0	755 aa	Predicted RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	F2RL3	Q96RI0	385 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	TRIB1	Q96RU8	372 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	EGFL8	Q99944	293 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	DOHH	Q9BU89	302 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	PLAC1	Q9HBJ0	212 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	XAB2	Q9HCS7	855 aa	Known RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	QPCTL	Q9NXS2	382 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	COPS7A	Q9UBW8	275 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	BOK	Q9UMX3	212 aa	Predicted RBP	4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	SVEP1	Q4LDE5	3571 aa		4.69	□□□□□ -1.66
TCF4-223	ENST00000564343	USF3	Q68DE3	2245 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	NCF1B	A6NI72	391 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	CD8B2	A6NJW9	211 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	WASHC1	A8K0Z3	465 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	NCF1C	A8MVU1	366 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343		H3BUI4	141 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	TAPBP	O15533	448 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ARHGEF9	O43307	516 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	FGF17	O60258	216 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SH3BGRL	O75368	114 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	PRKRA	O75569	313 aa	Known RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	TRAPPC6A	O75865	159 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	GOSR1	O95249	250 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	CLPS	P04118	112 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	HPN	P05981	417 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	NCF1	P14598	390 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	PGAM1	P18669	254 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ZNF10	P21506	573 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ATP5A1	P25705	553 aa	Known RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	STT3A	P46977	705 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SLC6A12	P48065	614 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	NAGLU	P54802	743 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	PROK1	P58294	105 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	IGLV3-21	P80748	117 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	CDKL1	Q00532	357 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SERTAD2	Q14140	314 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	TSN	Q15631	228 aa	Known RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	NTRK2	Q16620	822 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	EIPR1	Q53HC9	387 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	C18orf63	Q68DL7	685 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	FAM45BP	Q6NSW5	357 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	TMEM64	Q6YI46	380 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	GALNT7	Q86SF2	657 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	MYLK4	Q86YV6	388 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	P3H2	Q8IVL5	708 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	PM20D2	Q8IYS1	436 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	LRRC75A-AS1	Q8N1F1	130 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	TXLNB	Q8N3L3	684 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SLC15A4	Q8N697	577 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ACOT4	Q8N9L9	421 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	C9orf106	Q8NAJ2	232 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SLC22A8	Q8TCC7	542 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	FAM45A	Q8TCE6	357 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ANKRD49	Q8WVL7	239 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	MAIP1	Q8WWC4	291 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SMPDL3B	Q92485	455 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	RAB24	Q969Q5	203 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ESAM	Q96AP7	390 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	RHBDF1	Q96CC6	855 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	PERP	Q96FX8	193 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	CERS2	Q96G23	380 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	MS4A14	Q96JA4	679 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	ZNF597	Q96LX8	424 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	DACH2	Q96NX9	599 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	DGAT2	Q96PD7	388 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	GAL3ST4	Q96RP7	486 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	TMEM79	Q9BSE2	394 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	RBM24	Q9BX46	236 aa	Known RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	SORBS1	Q9BX66	1292 aa	Known RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	UGT2B28	Q9BY64	529 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	UBQLN3	Q9H347	655 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	NT5DC2	Q9H857	520 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	LYRM4	Q9HD34	91 aa		4.68	□□□□□ -1.66
TCF4-223	ENST00000564343	PPAN	Q9NQ55	473 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms