RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 IGKV1D-16P01601 117 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 GRK5P34947 590 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 CXCL12P48061 93 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 C21orf59P57076 290 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 IGLV3-21P80748 117 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-203ENST00000563226 ZNF91Q05481 1191 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 MFSD4BQ5TF39 518 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 SLC36A4Q6YBV0 504 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 OR6C4Q8NGE1 309 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 FGF11Q92914 225 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 CDCA4Q9BXL8 241 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 POLDIP3Q9BY77 421 aaKnown RBP17.74■□□□□ 0.43
SMPD3-203ENST00000563226 NECTIN3Q9NQS3 549 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 MAU2Q9Y6X3 613 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 HYAL3O43820 417 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 CLPXO76031 633 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 PIPP12273 146 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 IFNA8P32881 189 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 SEPHS1P49903 392 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 CFHR1Q03591 330 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 WDR88Q6ZMY6 472 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 RRM2BQ7LG56 351 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 ZNF595Q8IYB9 648 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 SLC25A45Q8N413 288 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 POGLUT1Q8NBL1 392 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 RBM18Q96H35 190 aaKnown RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 PRSS27Q9BQR3 290 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 LMF2Q9BU23 707 aaKnown RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 TSSK6Q9BXA6 273 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 MRPS33Q9Y291 106 aaKnown RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 AK1P00568 194 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 DBTP11182 482 aaKnown RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 GADD45AP24522 165 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 IFNGR2P38484 337 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 AFF3P51826 1226 aaKnown RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 SKP1P63208 163 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 EFNB1P98172 346 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 ZNF267Q14586 743 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-203ENST00000563226 OCLNQ16625 522 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 SYT14P1Q58G82 188 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 CLEC12AQ5QGZ9 265 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 GARNL3Q5VVW2 1013 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 NPSR1Q6W5P4 371 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 RASSF6Q6ZTQ3 369 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 MBOAT2Q6ZWT7 520 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 SLC46A3Q7Z3Q1 461 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 SLC35F3Q8IY50 421 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 OR51Q1Q8NH59 317 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 TEX47Q8TBZ9 253 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 ZDHHC12Q96GR4 267 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 Q96MT0 163 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 VSTM2LQ96N03 204 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 PHOX2BQ99453 314 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 EPHA6Q9UF33 1036 aa17.73■□□□□ 0.43
SMPD3-203ENST00000563226 IGHV1OR21-1A0A087WYE8 117 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 FITM1A5D6W6 292 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 KLF4O43474 513 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 LYPD3O95274 346 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 GNSP15586 552 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 SMSP52788 366 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 NNATQ16517 81 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 AMZ1Q400G9 498 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 FLYWCH1Q4VC44 716 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 ARMCX4Q5H9R4 360 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 TSSK4Q6SA08 328 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 RANBP3LQ86VV4 465 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-203ENST00000563226 FAM26EQ8N5C1 309 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 WDR36Q8NI36 951 aaKnown RBP17.72■□□□□ 0.43
SMPD3-203ENST00000563226 DGAT2Q96PD7 388 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 CNPPD1Q9BV87 410 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 RAB33BQ9H082 229 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 CLEC2DQ9UHP7 191 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 UNC13CQ8NB66 2214 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 ARID1BQ8NFD5 2236 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-203ENST00000563226 CABIN1Q9Y6J0 2220 aa17.72■□□□□ 0.43
SMPD3-203ENST00000563226 CDC42EP2O14613 210 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 HSMCR30P0CW71 290 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 GIMD1P0DJR0 217 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 EPHA4P54764 986 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 OR1Q1Q15612 314 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 SNAPC1Q16533 368 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 PDZK1Q5T2W1 519 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 SDR16C5Q8N3Y7 309 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 C9orf43Q8TAL5 461 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 LGALS12Q96DT0 336 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 AHCYL2Q96HN2 611 aaKnown RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 LRR1Q96L50 414 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 ERVK-19Q9WJR5 959 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 GPR52Q9Y2T5 361 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 EFCAB9A8MZ26 197 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 H3BMH7 237 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 FPR3P25089 353 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 CD1CP29017 333 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 GPR3P46089 330 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 BMXP51813 675 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 PGDP52209 483 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 MED22Q15528 200 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 ANKDD1AQ495B1 522 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 TCTE1Q5JU00 501 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 SNAP47Q5SQN1 464 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms