RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 UQCRC2P22695 453 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 TCEA1P23193 301 aaKnown RBP12.64□□□□□ -0.39
TPM1-230ENST00000561266 MRPL19P49406 292 aaKnown RBP12.64□□□□□ -0.39
TPM1-230ENST00000561266 POLR2JP52435 117 aaKnown RBP12.64□□□□□ -0.39
TPM1-230ENST00000561266 CRYZQ08257 329 aaKnown RBP12.64□□□□□ -0.39
TPM1-230ENST00000561266 CD226Q15762 336 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.64□□□□□ -0.39
TPM1-230ENST00000561266 DPY19L1Q2PZI1 675 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 VPS26BQ4G0F5 336 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 COX20Q5RI15 118 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 DCST2Q5T1A1 773 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
TPM1-230ENST00000561266 ACAD11Q709F0 780 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 LSRQ86X29 649 aaPredicted RBP12.64□□□□□ -0.39
TPM1-230ENST00000561266 PLCZ1Q86YW0 608 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 RAB8BQ92930 207 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 CHMP6Q96FZ7 201 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 SLC35G5Q96KT7 338 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 SDF2Q99470 211 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 OR51I1Q9H343 314 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 FAM215AQ9Y5M1 114 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 SETXQ7Z333 2677 aaKnown RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 CCDC154A6NI56 674 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 NPIPB9F8W1W9 429 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 GMFGO60234 142 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 FCMRO60667 390 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 CBR3O75828 277 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 OR12D1P0DN82 309 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 HOXB9P17482 250 aaPredicted RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 BMP7P18075 431 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 ELAVL4P26378 380 aaKnown RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 COL8A1P27658 744 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 MVDP53602 400 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 B3GALT5-AS1P59052 145 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 PSPHP78330 225 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 TOMM20Q15388 145 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.63□□□□□ -0.399e-6■■■■□ 24.9
TPM1-230ENST00000561266 TIGD2Q4W5G0 525 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 TNFAIP8L2Q6P589 184 aaPredicted RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 MIER2Q8N344 545 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 MIPOL1Q8TD10 442 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 MOAP1Q96BY2 351 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 NEURL3Q96EH8 262 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 TIMP4Q99727 224 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 UGT2B28Q9BY64 529 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 OR2B2Q9GZK3 357 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 EXO5Q9H790 373 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 FGFR1OP2Q9NVK5 253 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 FAF1Q9UNN5 650 aaPredicted RBP12.63□□□□□ -0.39
TPM1-230ENST00000561266 ABCG2Q9UNQ0 655 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
TPM1-230ENST00000561266 FAM234BA2RU67 622 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 OR14I1A6ND48 311 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 SHISA8B8ZZ34 492 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ALG1L2C9J202 215 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 PRRG2O14669 202 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ANGPTL1O95841 491 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 CAPN3P20807 821 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 TBXA2RP21731 343 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 STARP49675 285 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 MAPK11Q15759 364 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 NDUFAF6Q330K2 333 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 VASNQ6EMK4 673 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 HEPHL1Q6MZM0 1159 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 SLC2A7Q6PXP3 512 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 PLXDC2Q6UX71 529 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ZNF621Q6ZSS3 439 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 SEM1Q6ZVN7 128 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 HMGN2P46Q86SG4 172 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 RNF130Q86XS8 419 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
TPM1-230ENST00000561266 CHDHQ8NE62 594 aaPredicted RBP12.62□□□□□ -0.39
TPM1-230ENST00000561266 OR5M1Q8NGP8 315 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 PNPT1Q8TCS8 783 aaKnown RBP12.62□□□□□ -0.39
TPM1-230ENST00000561266 GTF2H4Q92759 462 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ZG16BQ96DA0 208 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
TPM1-230ENST00000561266 PANX1Q96RD7 426 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ZBTB18Q99592 522 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 SLAMF8Q9P0V8 285 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 PPP4R1LQ9P1A2 415 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 B4GALT7Q9UBV7 327 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 ACAD8Q9UKU7 415 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 PCDHGB4Q9UN71 923 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 RPH3AQ9Y2J0 694 aaPredicted RBP12.62□□□□□ -0.39
TPM1-230ENST00000561266 MED12LQ86YW9 2145 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
TPM1-230ENST00000561266 IGLV3-32A0A0A0MS00 114 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 C15orf38-AP3S2A0A0A6YYH1 394 aa12.61□□□□□ -0.39
TPM1-230ENST00000561266 E9PLN8 166 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms