RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RAET1LQ5VY80 246 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 CDC73Q6P1J9 531 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 SPATA19Q7Z5L4 167 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 CAMKMTQ7Z624 323 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 ANKRD46Q86W74 232 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 LRRC34Q8IZ02 419 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 PIWIL2Q8TC59 973 aaKnown RBP11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 SFXN5Q8TD22 340 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 NTNG2Q96CW9 530 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 BTBD2Q9BX70 525 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 UCK2Q9BZX2 261 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR2B2Q9GZK3 357 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 PIGUQ9H490 435 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 KCNJ16Q9NPI9 418 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 DUSP22Q9NRW4 184 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 GIN1Q9NXP7 522 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 A0A0G2JNJ9 132 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 C9JVG2 144 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 E9PBE3 544 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 OXSR1O95747 527 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 IL2RAP01589 272 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 ALDOCP09972 364 aaKnown RBP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 S100A3P33764 101 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 MAP3K8P41279 467 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 STARP49675 285 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 WNT3P56703 355 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 UFM1P61960 85 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 RPS26P62854 115 aaKnown RBP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 DPY19L1Q2PZI1 675 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 ACSF3Q4G176 576 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 TTMPQ5BVD1 217 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 NHSL2Q5HYW2 709 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 SPANXN4Q5MJ08 99 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 OGFOD2Q6N063 350 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 CHMP1BQ7LBR1 199 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 UBQLNLQ8IYU4 475 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 CLEC4FQ8N1N0 589 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 ZNF614Q8N883 585 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR2M3Q8NG83 312 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR8J2Q8NGG1 315 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR5D16Q8NGK9 328 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR4C3Q8NH37 302 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 LILRB4Q8NHJ6 448 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 PSMA8Q8TAA3 256 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 HOXB13Q92826 284 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 TESCQ96BS2 214 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 WDYHV1Q96HA8 205 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 MARK4Q96L34 752 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 STACQ99469 402 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 RTN4RQ9BZR6 473 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 PRDM14Q9GZV8 571 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 UBQLN4Q9NRR5 601 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 AIG1Q9NVV5 245 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 FBXO34Q9NWN3 711 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 Q9UFV3 132 aa11.78□□□□□ -0.52
CTDSPL2-209ENST00000560620 NUP214P35658 2090 aaPredicted RBP11.77□□□□□ -0.52
CTDSPL2-209ENST00000560620 CRYBG3Q68DQ2 2970 aa11.77□□□□□ -0.52
CTDSPL2-209ENST00000560620 PRSS51A0A1B0GVH4 220 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 HSPB2A8KAH6 182 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 HMGB1P1B2RPK0 211 aaPredicted RBP11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 C19orf84I3L1E1 186 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 KLF11O14901 512 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 SOX30O94993 753 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 EPPINO95925 133 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 TBXA2RP21731 343 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 MATN1P21941 496 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 ADH7P40394 386 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 DGKQP52824 942 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 CASP9P55211 416 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 GANABQ14697 944 aaKnown RBP11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 HSPB2Q16082 182 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 FLYWCH1Q4VC44 716 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLC9B1Q4ZJI4 515 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 DCST2Q5T1A1 773 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 RIPPLY2Q5TAB7 128 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 C6orf120Q7Z4R8 191 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZAR1Q86SH2 424 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 LACC1Q8IV20 430 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF527Q8NB42 609 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 RNF138Q8WVD3 245 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 SH3YL1Q96HL8 342 aaPredicted RBP11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLC35G5Q96KT7 338 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR7D2Q96RA2 312 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 VIPAS39Q9H9C1 493 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 HHATLQ9HCP6 504 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 VDAC3Q9Y277 283 aa11.77□□□□□ -0.53
CTDSPL2-209ENST00000560620 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 KDM4EB2RXH2 506 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 ALG1L2C9J202 215 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 H3BML4 177 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 H3BNH8 94 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZIC3O60481 467 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 NUDT14O95848 222 aa11.76□□□□□ -0.53
CTDSPL2-209ENST00000560620 IDO1P14902 403 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms