RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 NPIPA7E9PJI5 369 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 CLIC1O00299 241 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 FCMRO60667 390 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 ZIC2O95409 532 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 OXSR1O95747 527 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 AGR2O95994 175 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 AK1P00568 194 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 NPIPA8P0DM63 369 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 ATP6V1C1P21283 382 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 ELAVL4P26378 380 aaKnown RBP18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 FUT5Q11128 374 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 FGD2Q7Z6J4 655 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 DUSP19Q8WTR2 217 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 NSRP1Q9H0G5 558 aaKnown RBP18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 MRGBPQ9NV56 204 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 QPCTLQ9NXS2 382 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 VAPAQ9P0L0 249 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 LIPGQ9Y5X9 500 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 FLNCQ14315 2725 aa18.5■□□□□ 0.55
TSPAN3-207ENST00000559494 ALG1L2C9J202 215 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 NPIPB9F8W1W9 429 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 FBP2O00757 339 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 CDC40O60508 579 aaKnown RBP eCLIP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 IGHG3P01860 377 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 GDF1P27539 372 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ADSLP30566 484 aaPredicted RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 CLK3P49761 638 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 TXNL4AP83876 142 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ELOAQ14241 798 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ATAD3BQ5T9A4 648 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 AP1ARQ63HQ0 302 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 C16orf62Q7Z3J2 963 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 PLCZ1Q86YW0 608 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 GHDCQ8N2G8 530 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 DPP10Q8N608 796 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ROPN1LQ96C74 230 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 TBL1XR1Q9BZK7 514 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ARMCX1Q9P291 453 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 MYO7BQ6PIF6 2116 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 GCN1Q92616 2671 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 BAHCC1Q9P281 2608 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 UBR5O95071 2799 aaPredicted RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 A0A1B0GTH9 108 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 STX11O75558 287 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 CBR3O75828 277 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ANGPTL1O95841 491 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ETFAP13804 333 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 MAGEA8P43361 318 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ATP12AP54707 1039 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 SYPL1Q16563 259 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 FLYWCH1Q4VC44 716 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 TRILQ7L0X0 811 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 PIGWQ7Z7B1 504 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 MTDHQ86UE4 582 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ANKFN1Q8N957 763 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ZNF350Q9GZX5 532 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 HOXD1Q9GZZ0 328 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 ACKR4Q9NPB9 350 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 SDHAF3Q9NRP4 125 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 PPP4R1LQ9P1A2 415 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 B4GALT7Q9UBV7 327 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 KCNE5Q9UJ90 142 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 FBXL2Q9UKC9 423 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 MKLN1Q9UL63 735 aa18.49■□□□□ 0.55
TSPAN3-207ENST00000559494 LOC100653049A0A140TA62 436 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 A0A1B0GVC2 190 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 ANGPT2O15123 496 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 CCDC22O60826 627 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 TRAPPC6AO75865 159 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 KRT34O76011 436 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 HPNP05981 417 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 DCTP40126 519 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 CRATP43155 626 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 ANXA11P50995 505 aaKnown RBP18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 STX5Q13190 355 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 RGNQ15493 299 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 GPR68Q15743 365 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 MAPK11Q15759 364 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 KLHL26Q53HC5 615 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 FADS6Q8N9I5 356 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 GATSQ8NAP1 163 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 OR2M3Q8NG83 312 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 PRR7Q8TB68 274 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 SAP130Q9H0E3 1048 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 DSN1Q9H410 356 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 MED11Q9P086 117 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 OSGIN2Q9Y236 505 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 ZNF835Q9Y2P0 537 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 GMEB1Q9Y692 573 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 CAPN7Q9Y6W3 813 aa18.48■□□□□ 0.55
TSPAN3-207ENST00000559494 DIDO1Q9BTC0 2240 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 A0A1W2PQD3 144 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 SCDO00767 359 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 SLC22A2O15244 555 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 NDUFB5O43674 189 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 GUSBP08236 651 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 HPGDP15428 266 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 C17orf67Q0P5P2 114 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 GPAT3Q53EU6 434 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms