RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 TRPC1P48995 793 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 EEFSECP57772 596 aaKnown RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 TXNL4AP83876 142 aaKnown RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 MGAT2Q10469 447 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 GANABQ14697 944 aaKnown RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 KIAA0040Q15053 153 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 LTB4RQ15722 352 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 RFTN2Q52LD8 501 aaPredicted RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 XKR7Q5GH72 579 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 C6orf136Q5SQH8 315 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 IL23RQ5VWK5 629 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 Q6ZSR9 355 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 MISPQ8IVT2 679 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 TRIML2Q8N7C3 387 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 OR4K17Q8NGC6 315 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 GOT1L1Q8NHS2 421 aaPredicted RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 NEIL3Q8TAT5 605 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP3-208ENST00000558285 GPR151Q8TDV0 419 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 C10orf82Q8WW14 230 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 TMBIM1Q969X1 311 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 MCUR1Q96AQ8 359 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 CCDC120Q96HB5 630 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 VSTM2LQ96N03 204 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 ADOQ96SZ5 270 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 MRPS26Q9BYN8 205 aaKnown RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 TBL1XR1Q9BZK7 514 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 DPY30Q9C005 99 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 GLIPR2Q9H4G4 154 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 PLGRKTQ9HBL7 147 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 DEPPQ9NTK1 212 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 FAM120CQ9NX05 1096 aaKnown RBP7.94□□□□□ -1.14
USP3-208ENST00000558285 NDE1Q9NXR1 346 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 PPP4R1LQ9P1A2 415 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 ATP6V1HQ9UI12 483 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 TINAGQ9UJW2 476 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 DKKL1Q9UK85 242 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 CCL27Q9Y4X3 112 aa7.94□□□□□ -1.14
USP3-208ENST00000558285 POLEQ07864 2286 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 A1L4Q6 167 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 TRIM3O75382 744 aaPredicted RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 CIB2O75838 187 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 LRATO95237 230 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 AK1P00568 194 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 CLPSP04118 112 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 HPNP05981 417 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 DHRS4L1P0CG22 281 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 UQCRBP14927 111 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 CHRNB4P30926 498 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 ST13P50502 369 aaKnown RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 CDK9P50750 372 aaKnown RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 ARPC4P59998 168 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 PDE7AQ13946 482 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 NNATQ16517 81 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 ZNF585AQ6P3V2 769 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 TMEM64Q6YI46 380 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 SPATA19Q7Z5L4 167 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 DOLPP1Q86YN1 238 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 PLCZ1Q86YW0 608 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 PRR22Q8IZ63 422 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 MMP21Q8N119 569 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 COX18Q8N8Q8 333 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 OR7G2Q8NG99 324 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 OR52N2Q8NGI0 321 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 OR10Q1Q8NGQ4 319 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 OR14L1PQ8NHC6 308 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 SFXN5Q8TD22 340 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 DOK4Q8TEW6 326 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 JADE3Q92613 823 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 UCN3Q969E3 161 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 ABTB1Q969K4 478 aaPredicted RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 EFHD2Q96C19 240 aaPredicted RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 NSL1Q96IY1 281 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 LMF2Q9BU23 707 aaKnown RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 CADM1Q9BY67 442 aaKnown RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 Q9H521 79 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 MANSC1Q9H8J5 431 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 GIN1Q9NXP7 522 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 ZDHHC2Q9UIJ5 367 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 EXO1Q9UQ84 846 aaKnown RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 FAM32AQ9Y421 112 aaKnown RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 SNX8Q9Y5X2 465 aa7.93□□□□□ -1.14
USP3-208ENST00000558285 UBR5O95071 2799 aaPredicted RBP7.93□□□□□ -1.14
USP3-208ENST00000558285 HSPB2A8KAH6 182 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 UPK1AO00322 258 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SCDO00767 359 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 HDAC3O15379 428 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 GYG2O15488 501 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ICOSLGO75144 302 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SERPINB7O75635 380 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 KRT36O76013 467 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 IL33O95760 270 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CT45A8P0DMV1 189 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CT45A9P0DMV2 189 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 COX6B1P14854 86 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ANPEPP15144 967 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ZNF12P17014 697 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 BGNP21810 368 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 MSX1P28360 303 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 GABRA3P34903 492 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms