RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 FAM25CB3EWG5 89 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 FAM25GB3EWG6 89 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 FAM47E-STBD1D6RA91 191 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 VEGFDO43915 354 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 RASGRP1O95267 797 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 SLC16A8O95907 504 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 PTHP01270 115 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 VIPP01282 170 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 PRKAR1AP10644 381 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 ETFAP13804 333 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 PNLIPP16233 465 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 ALOX12P18054 663 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 GALP22466 123 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 DDOSTP39656 456 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 KIAA1024LP59773 190 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 TBPL1P62380 186 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 C2orf80Q0P641 193 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 DDX39BQ13838 428 aaKnown RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 SLBPQ14493 270 aaKnown RBP eCLIP10.39□□□□□ -0.75
SRP54-205ENST00000554803 LAPTM4AQ15012 233 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 SPHARQ15513 63 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 MAPK11Q15759 364 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 DEFB109BQ30KR1 87 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 ZNF658BQ4V348 819 aaPredicted RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 DCST1Q5T197 706 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 MFSD4BQ5TF39 518 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 SAXO2Q658L1 398 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 BHLHB9Q6PI77 547 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 XKRXQ6PP77 449 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 NXPE4Q6UWF7 544 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 ANGPTL8Q6UXH0 198 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 TMPRSS11AQ6ZMR5 421 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 C11orf96Q7Z7L8 435 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 TMPRSS11BQ86T26 416 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 LRRC56Q8IYG6 542 aaPredicted RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 AQP11Q8NBQ7 271 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 SIMC1Q8NDZ2 872 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 OR10Q1Q8NGQ4 319 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 NFKBIDQ8NI38 313 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 CPT1CQ8TCG5 803 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 OR1E3Q8WZA6 343 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 PMEPA1Q969W9 287 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 MOAP1Q96BY2 351 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 ZNF486Q96H40 463 aaPredicted RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 PKP4Q99569 1192 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 CHCHD6Q9BRQ6 235 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 TEX12Q9BXU0 123 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 POLDIP3Q9BY77 421 aaKnown RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 SEMA6CQ9H3T2 930 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 SLC23A2Q9UGH3 650 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 MOSPD1Q9UJG1 213 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 DIMT1Q9UNQ2 313 aaKnown RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 SLC17A4Q9Y2C5 497 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 LSM2Q9Y333 95 aaKnown RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 PLEKHM1Q9Y4G2 1056 aa10.39□□□□□ -0.75
SRP54-205ENST00000554803 CFAP20Q9Y6A4 193 aaKnown RBP10.39□□□□□ -0.75
SRP54-205ENST00000554803 NIPBLQ6KC79 2804 aaeCLIP10.38□□□□□ -0.75
SRP54-205ENST00000554803 LOC100506127A0A0U1RQW1 187 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 A0A1W2PRQ8 180 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 PRSS38A1L453 326 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 K7EM74 188 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 TNFRSF10CO14798 259 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 RAD1O60671 282 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 CCNKO75909 580 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 C6orf47O95873 294 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 TNFP01375 233 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 H1F0P07305 194 aaKnown RBP10.38□□□□□ -0.75
SRP54-205ENST00000554803 NUDT7P0C024 238 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 GSTT2P0CG29 244 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 GSTT2BP0CG30 244 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 DDCP20711 480 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 PPP2R1BP30154 601 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 FRKP42685 505 aaPredicted RBP10.38□□□□□ -0.75
SRP54-205ENST00000554803 PREPP48147 710 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 ASAH1Q13510 395 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 MED22Q15528 200 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 TCEA2Q15560 299 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 SLC5A12Q1EHB4 618 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 ARMC4Q5T2S8 1044 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 DESI1Q6ICB0 168 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 KLHL17Q6TDP4 642 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 ENPP7Q6UWV6 458 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 FAM83HQ6ZRV2 1179 aaPredicted RBP10.38□□□□□ -0.75
SRP54-205ENST00000554803 LRRTM4Q86VH4 590 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 RAB43Q86YS6 212 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 SYTL1Q8IYJ3 562 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 Q8N9G6 341 aaPredicted RBP10.38□□□□□ -0.75
SRP54-205ENST00000554803 IL17RDQ8NFM7 739 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 GPR156Q8NFN8 814 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 TOR1AIP2Q8NFQ8 470 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 ZNF480Q8WV37 535 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 TRIM63Q969Q1 353 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 NEIL2Q969S2 332 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 TSACCQ96A04 125 aaPredicted RBP10.38□□□□□ -0.75
SRP54-205ENST00000554803 RAD51AP1Q96B01 352 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 ZBED6CLQ96FA7 236 aaPredicted RBP10.38□□□□□ -0.75
SRP54-205ENST00000554803 ZNF354BQ96LW1 612 aa10.38□□□□□ -0.75
SRP54-205ENST00000554803 WDR92Q96MX6 357 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms