RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 METAP1P53582 386 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 LIM2P55344 173 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 IL9RQ01113 521 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 RGS1Q08116 209 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 PEX6Q13608 980 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 CELF3Q5SZQ8 465 aaKnown RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 SCYL2Q6P3W7 929 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 KCNIP4Q6PIL6 250 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 CCBE1Q6UXH8 406 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 TMUB2Q71RG4 321 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 HSD11B1LQ7Z5J1 315 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 CDC20BQ86Y33 519 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 SLC38A6Q8IZM9 456 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 LINC01561Q8N1V8 128 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 OR2T33Q8NG76 320 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 OR5AU1Q8NGC0 362 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 OR2T3Q8NH03 318 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 NANPQ8TBE9 248 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 FNDC8Q8TC99 324 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 CTNNBL1Q8WYA6 563 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 AKR1E2Q96JD6 320 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 RANBP9Q96S59 729 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 GPA33Q99795 319 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 PUS3Q9BZE2 481 aaKnown RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 COG4Q9H9E3 785 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 ELOVL2Q9NXB9 296 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 RAI14Q9P0K7 980 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 CIDEBQ9UHD4 219 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 XPO7Q9UIA9 1087 aaKnown RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 SMC3Q9UQE7 1217 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 HCFC1P51610 2035 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 ATP10DQ9P241 1426 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 CARMIL1Q5VZK9 1371 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 TRBV7-9A0A0J9YWB2 115 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF840PA6NDX5 716 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 GPR89AB7ZAQ6 455 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 G3V3Y1 287 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 K7EQM0 130 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 MPHOSPH10O00566 681 aaKnown RBP2.41□□□□□ -2.02
SCFD1-213ENST00000554776 CTAGE5O15320 804 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 TM9SF1O15321 606 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 LCMT2O60294 686 aaKnown RBP2.41□□□□□ -2.02
SCFD1-213ENST00000554776 SH3BGRLO75368 114 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 MTX2O75431 263 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 B3GAT3O94766 335 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 NOL4O94818 638 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 KIAA0754O94854 1291 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 MFN2O95140 757 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 F10P00742 488 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 IGF1P05019 195 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 IQCF3P0C7M6 154 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 FAM200BP0CF97 657 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 GPR89BP0CG08 455 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 SLC35E2P0CK97 266 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 HNF1AP20823 631 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ADSSP30520 456 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 IL2RGP31785 369 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 PRPHP41219 470 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 OR1D4P47884 311 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 RGS4P49798 205 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 RPL8P62917 257 aaKnown RBP2.41□□□□□ -2.02
SCFD1-213ENST00000554776 NTHL1P78549 312 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 EWSR1Q01844 656 aaKnown RBP eCLIP2.41□□□□□ -2.02
SCFD1-213ENST00000554776 PUDPQ08623 228 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 RUNX3Q13761 415 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 PDK4Q16654 411 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 MAJINQ3KP22 176 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 GGTA1PQ4G0N0 100 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 CCDC152Q4G0S7 254 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 PYHIN1Q6K0P9 492 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF774Q6NX45 483 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 TMEM184AQ6ZMB5 413 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 RGS9BPQ6ZS82 235 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 PPP1R42Q7Z4L9 355 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 LRRC43Q8N309 656 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 BPIFB2Q8N4F0 458 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 DENND6BQ8NEG7 585 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 OR2L2Q8NH16 312 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 TOMM40LQ969M1 308 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ZBED6CLQ96FA7 236 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF607Q96SK3 696 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 TXN2Q99757 166 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ZSCAN5AQ9BUG6 496 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ZBP1Q9H171 429 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 GORASP2Q9H8Y8 452 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ELOVL3Q9HB03 270 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 AMBNQ9NP70 447 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 FAM120CQ9NX05 1096 aaKnown RBP2.41□□□□□ -2.02
SCFD1-213ENST00000554776 LCMT1Q9UIC8 334 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 ANAPC7Q9UJX3 599 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 NTNG1Q9Y2I2 539 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 GSTK1Q9Y2Q3 226 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 GRIN2DO15399 1336 aa2.41□□□□□ -2.02
SCFD1-213ENST00000554776 KDRP35968 1356 aa2.4□□□□□ -2.02
SCFD1-213ENST00000554776 GSAPA4D1B5 854 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 FRG2CA6NGY1 282 aa2.4□□□□□ -2.03
SCFD1-213ENST00000554776 SAGE2PA6NJ88 616 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms