RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CPMP14384 443 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 TLX1P31314 330 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-212ENST00000554467 DDOSTP39656 456 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 TSFMP43897 325 aaKnown RBP10.91□□□□□ -0.66
SHMT2-212ENST00000554467 LIMS1P48059 325 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 GPR50Q13585 617 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 KEAP1Q14145 624 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 PXDC1Q5TGL8 231 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF544Q6NX49 715 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SLC7A13Q8TCU3 470 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 RASSF5Q8WWW0 418 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 DCSTAMPQ9H295 470 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SLC38A1Q9H2H9 487 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 PHF11Q9UIL8 331 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 ENTPD2Q9Y5L3 495 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 NCOR1O75376 2440 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 URADA6NGE7 173 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 EFCAB9A8MZ26 197 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 CTDSP2O14595 271 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 CTRB1P17538 263 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 ELAVL4P26378 380 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 SLC35A2P78381 396 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 MADCAM1Q13477 382 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 DUSP5Q16690 384 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF311Q5JNZ3 666 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 FAM205BPQ63HN1 556 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 CTRB2Q6GPI1 263 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 BHLHB9Q6PI77 547 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 TMEM64Q6YI46 380 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 NRARPQ7Z6K4 114 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 SLC30A8Q8IWU4 369 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 C19orf47Q8N9M1 422 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 OR4M1Q8NGD0 313 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 COPS4Q9BT78 406 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 CDADC1Q9BWV3 514 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 C12orf10Q9HB07 376 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 TAS2R16Q9NYV7 291 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 B8ZZF3 427 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 PRKNO60260 465 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 GALR3O60755 368 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 H1F0P07305 194 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 NME1P15531 152 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 MAN2A2P49641 1150 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 ELOAQ14241 798 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 ELOCQ15369 112 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 AMZ1Q400G9 498 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 IDO2Q6ZQW0 420 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 RNF44Q7L0R7 432 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 MCATQ8IVS2 390 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 HRASLS5Q96KN8 279 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 SEMA6CQ9H3T2 930 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 RANGRFQ9HD47 186 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 SOHLH2Q9NX45 425 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 A4GNTQ9UNA3 340 aa10.9□□□□□ -0.66
SHMT2-212ENST00000554467 MRPS17Q9Y2R5 130 aaKnown RBP10.9□□□□□ -0.66
SHMT2-212ENST00000554467 LINC00854A0A1B0GVQ3 168 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 SAGE2PA6NJ88 616 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 CPSF4LA6NMK7 179 aaKnown RBP10.9□□□□□ -0.67
SHMT2-212ENST00000554467 ANXA8P13928 327 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 GRK5P34947 590 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 POU6F2P78424 691 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-212ENST00000554467 PTGES3Q15185 160 aaKnown RBP10.9□□□□□ -0.67
SHMT2-212ENST00000554467 GPR68Q15743 365 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 TBRG1Q3YBR2 411 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 MFSD12Q6NUT3 480 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 CA13Q8N1Q1 262 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 FAM109AQ8N4B1 249 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 IQCF1Q8N6M8 205 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 SFXN5Q8TD22 340 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 PEX11GQ96HA9 241 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 GABARAPL3Q9BY60 117 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 ACTRT3Q9BYD9 372 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 MMP27Q9H306 513 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 ACOT13Q9NPJ3 140 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.67
SHMT2-212ENST00000554467 FKBP14Q9NWM8 211 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 IMPAD1Q9NX62 359 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 ZSCAN32Q9NX65 697 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 TMCC3Q9ULS5 477 aa10.9□□□□□ -0.67
SHMT2-212ENST00000554467 H3BN98 237 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 HRKO00198 91 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CYR61O00622 381 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 UGT2B17O75795 530 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 PROS1P07225 676 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CCDC159P0C7I6 412 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 LIPAP38571 399 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CTSKP43235 329 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 TARDBPQ13148 414 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHMT2-212ENST00000554467 IL18R1Q13478 541 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 DCST1Q5T197 706 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 BCDIN3DQ7Z5W3 292 aaKnown RBP10.89□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF566Q969W8 418 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 BEX2Q9BXY8 128 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 TWSG1Q9GZX9 223 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 DUSP21Q9H596 190 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 GPR83Q9NYM4 423 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 MAT2BQ9NZL9 334 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms