RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DOCK7Q96N67 2140 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 A0A1W2PNV4 684 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 FRG2CA6NGY1 282 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 PLOD2O00469 737 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 MSTNO14793 375 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 CASKO14936 926 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 ZIC3O60481 467 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 ABCB7O75027 752 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 PEX11AO75192 247 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 SNNO75324 88 aaPredicted RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 DDCP20711 480 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 MAPK1P28482 360 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 FEN1P39748 380 aaKnown RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 MC3RP41968 323 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 STARP49675 285 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 DIO3P55073 304 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 RPL38P63173 70 aaKnown RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 SRYQ05066 204 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 DUSP2Q05923 314 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 PDCD2Q16342 344 aaPredicted RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 RFTN2Q52LD8 501 aaPredicted RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 TRMT12Q53H54 448 aaKnown RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 PRSS57Q6UWY2 283 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 IKBIPQ70UQ0 350 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 SAMD14Q8IZD0 417 aaPredicted RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 GCNT2Q8N0V5 402 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 ADCY4Q8NFM4 1077 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 OR52R1Q8NGF1 315 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF75CPQ92670 426 aaPredicted RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 PIGTQ969N2 578 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 TUBGCP3Q96CW5 907 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 TMCO6Q96DC7 493 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 ERP27Q96DN0 273 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 STARD4Q96DR4 205 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 CNRIP1Q96F85 164 aaPredicted RBP10.72□□□□□ -0.69
CKAP4-202ENST00000552828 SLC35A4Q96G79 324 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 COX4I2Q96KJ9 171 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 FCRL1Q96LA6 429 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 C3orf30Q96M34 536 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 COL21A1Q96P44 957 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 BTBD9Q96Q07 612 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 MIEF1Q9NQG6 463 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 GIMAP4Q9NUV9 329 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 EHD3Q9NZN3 535 aa10.72□□□□□ -0.69
CKAP4-202ENST00000552828 DEFB108AA8MXU0 73 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 KLF11O14901 512 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 SIAH2O43255 324 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 BCAS2O75934 225 aaPredicted RBP10.71□□□□□ -0.69
CKAP4-202ENST00000552828 LY6G6DO95868 133 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 TGM6O95932 706 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 CT45A8P0DMV1 189 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 CT45A9P0DMV2 189 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 PCSK2P16519 638 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 ASMTP46597 345 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 GAS1P54826 345 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 B3GALT5-AS1P59052 145 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 PSPHP78330 225 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 CT45A2Q5DJT8 189 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 Q5PR19 223 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 C6orf136Q5SQH8 315 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 FAM71E1Q6IPT2 247 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 PLXDC2Q6UX71 529 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 FNDC5Q8NAU1 212 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF675Q8TD23 568 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 LRRC8CQ8TDW0 803 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 DYDC1Q8WWB3 177 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 TMBIM1Q969X1 311 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 EXOSC8Q96B26 276 aaKnown RBP10.71□□□□□ -0.69
CKAP4-202ENST00000552828 DTNBP1Q96EV8 351 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 WFIKKN1Q96NZ8 548 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 SLC35C2Q9NQQ7 365 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 INTS9Q9NV88 658 aaKnown RBP10.71□□□□□ -0.69
CKAP4-202ENST00000552828 PNPOQ9NVS9 261 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 FBXL2Q9UKC9 423 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 TLN2Q9Y4G6 2542 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 WIF1Q9Y5W5 379 aa10.71□□□□□ -0.69
CKAP4-202ENST00000552828 MED12Q93074 2177 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 B4DXG7 233 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 SLCO1B7G3V0H7 640 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
CKAP4-202ENST00000552828 TSPAN2O60636 221 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 SMPD2O60906 423 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 JUNP05412 331 aaKnown RBP10.7□□□□□ -0.7
CKAP4-202ENST00000552828 PRPS2P11908 318 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 BCKDHAP12694 445 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 SDC1P18827 310 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 CRYGSP22914 178 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 MPIP34949 423 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 MRPS35P82673 323 aaKnown RBP10.7□□□□□ -0.7
CKAP4-202ENST00000552828 OCRLQ01968 901 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 FAM27E3Q08E93 113 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 MAD2L1Q13257 205 aaPredicted RBP10.7□□□□□ -0.7
CKAP4-202ENST00000552828 EFR3AQ14156 821 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 LTB4RQ15722 352 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 SMU1Q2TAY7 513 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 ZNF628Q5EBL2 1059 aa10.7□□□□□ -0.7
CKAP4-202ENST00000552828 OR2A2Q6IF42 318 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms