RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 COX4I1P13073 169 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 ABCD3P28288 659 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 DNAJA1P31689 397 aaKnown RBP12.23□□□□□ -0.45
NUP188-211ENST00000550219 KIR2DL3P43628 341 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 ASCL1P50553 236 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 MANFP55145 182 aaKnown RBP12.23□□□□□ -0.45
NUP188-211ENST00000550219 PLCXD2Q0VAA5 305 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 MGAT2Q10469 447 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 LTB4RQ15722 352 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 EIPR1Q53HC9 387 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 COQ5Q5HYK3 327 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 WIPI1Q5MNZ9 446 aaPredicted RBP12.23□□□□□ -0.45
NUP188-211ENST00000550219 DCST1Q5T197 706 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 DESI1Q6ICB0 168 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 ANGPTL8Q6UXH0 198 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 SNX32Q86XE0 403 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 DPP10Q8N608 796 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 ADCY4Q8NFM4 1077 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 OR7G1Q8NGA0 311 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 GOT1L1Q8NHS2 421 aaPredicted RBP12.23□□□□□ -0.45
NUP188-211ENST00000550219 ZNF675Q8TD23 568 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 ADIPOR1Q96A54 375 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 CTHRC1Q96CG8 243 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 CMTM5Q96DZ9 223 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 TRIB1Q96RU8 372 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 OSBPL11Q9BXB4 747 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 ANGPTL4Q9BY76 406 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 POLDIP3Q9BY77 421 aaKnown RBP12.23□□□□□ -0.45
NUP188-211ENST00000550219 ARL8BQ9NVJ2 186 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 MAT2BQ9NZL9 334 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 KLRF1Q9NZS2 232 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 NDUFAF1Q9Y375 327 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 F8P00451 2351 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 DNAJC13O75165 2243 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 AKAP9Q99996 3911 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 LOC100653049A0A140TA62 436 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ANKRD33BA6NCL7 494 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 PLOD2O00469 737 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 PPM1BO75688 479 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 KRT34O76011 436 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 SLITRK5O94991 958 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 SNX4O95219 450 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 C6orf47O95873 294 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 HOXB9P17482 250 aaPredicted RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 CASP3P42574 277 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 NCBP2P52298 156 aaKnown RBP eCLIP12.22□□□□□ -0.452e-7■□□□□ 8.7
NUP188-211ENST00000550219 IST1P53990 364 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 HBA1P69905 142 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 MAP4K2Q12851 820 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 STX5Q13190 355 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 PRICKLE4Q2TBC4 344 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ZNF628Q5EBL2 1059 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 PAGE3Q5JUK9 113 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 FNDC7Q5VTL7 733 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ZNF551Q7Z340 670 aaPredicted RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 YRDCQ86U90 279 aaKnown RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ANKRD46Q86W74 232 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 LACC1Q8IV20 430 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 PM20D2Q8IYS1 436 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 CLECL1Q8IZS7 167 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 SIMC1Q8NDZ2 872 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ZFP28Q8NHY6 868 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 OMA1Q96E52 524 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 HSPBAP1Q96EW2 488 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 LRRC46Q96FV0 321 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ITCHQ96J02 903 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 SECISBP2Q96T21 854 aaKnown RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 TIMP4Q99727 224 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 UGT2B28Q9BY64 529 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 RMND5AQ9H871 391 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 GALNT9Q9HCQ5 603 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 NEUROD4Q9HD90 331 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 SIRT3Q9NTG7 399 aaPredicted RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 NTMQ9P121 344 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 LEF1Q9UJU2 399 aaPredicted RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 PCDHGB3Q9Y5G1 929 aa12.22□□□□□ -0.45
NUP188-211ENST00000550219 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
NUP188-211ENST00000550219 A0A087WV62 115 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 A0A096LPI6 279 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 AHRRA9YTQ3 701 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 EEF1E1-BLOC1S5C9J1V9 151 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 EEF1E1O43324 174 aaKnown RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 EPPINO95925 133 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 IL2RAP01589 272 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 HPNP05981 417 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 T-ENOLP0DO92 83 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 EFNA1P20827 205 aaPredicted RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 S1PR1P21453 382 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 PTPN6P29350 595 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 AGFG1P52594 562 aaKnown RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 LRIF1Q5T3J3 769 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms