RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 TMEM52BQ4KMG9 183 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 OR6T1Q8NGN1 323 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 BCL2L14Q9BZR8 327 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 SERINC1Q9NRX5 453 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 LOC100509620A0A075B734 347 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 A0A1B0GVC2 190 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 CDC14CA4D256 554 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 A6NIN4 97 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 CASC3O15234 703 aaKnown RBP15.28■□□□□ 0.04
CUX1-213ENST00000549414 PPM1DO15297 605 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 CPMP14384 443 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 MAZP56270 477 aaKnown RBP15.28■□□□□ 0.04
CUX1-213ENST00000549414 PHC1P78364 1004 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 REEP5Q00765 189 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 GPR18Q14330 331 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 TMEM215Q68D42 235 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 SLC37A3Q8NCC5 494 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 SDHAF3Q9NRP4 125 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 PCDHGB6Q9Y5F9 930 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 SNX11Q9Y5W9 270 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 GFRA2O00451 464 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 DUX1O43812 170 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 TMPRSS11DO60235 418 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 ECDO95905 644 aaPredicted RBP15.28■□□□□ 0.04
CUX1-213ENST00000549414 AK1P00568 194 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 EPHA2P29317 976 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 CTHP32929 405 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 GPR143P51810 404 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 PITPNAQ00169 270 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 CTU2Q2VPK5 515 aaKnown RBP15.28■□□□□ 0.04
CUX1-213ENST00000549414 TBRG1Q3YBR2 411 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 BTN2A1Q7KYR7 527 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 ACOT11Q8WXI4 607 aaPredicted RBP15.28■□□□□ 0.04
CUX1-213ENST00000549414 MUL1Q969V5 352 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 PPP1R14BQ96C90 147 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
CUX1-213ENST00000549414 DIABLOQ9NR28 239 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 WBP1LQ9NX94 342 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 ENTPD2Q9Y5L3 495 aa15.28■□□□□ 0.04
CUX1-213ENST00000549414 A8MVJ9 347 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 WWP2O00308 870 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 PRODHO43272 600 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 ZNF217O75362 1048 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 TRIM3O75382 744 aaPredicted RBP15.27■□□□□ 0.04
CUX1-213ENST00000549414 EGFP01133 1207 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 UGT2B7P16662 529 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 TSPAN5P62079 268 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 ADAM8P78325 824 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 OLFML2AQ68BL7 652 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 PLEKHG7Q6ZR37 379 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 SDR9C7Q8NEX9 313 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 HS6ST2Q96MM7 605 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 FUZQ9BT04 418 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 FUOMA2VDF0 154 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 AP1G1O43747 822 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 ADH7P40394 386 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.04
CUX1-213ENST00000549414 TAS2R43P59537 309 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 PLGLB1Q02325 96 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 NKG7Q16617 165 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 LILRA6Q6PI73 481 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 PLPP6Q8IY26 295 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 SLC16A11Q8NCK7 471 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 DAZLQ92904 295 aaKnown RBP15.27■□□□□ 0.04
CUX1-213ENST00000549414 SACM1LQ9NTJ5 587 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 TBC1D29Q9UFV1 150 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 ITGB1BP2Q9UKP3 347 aa15.27■□□□□ 0.04
CUX1-213ENST00000549414 RBM7Q9Y580 266 aaKnown RBP15.27■□□□□ 0.04
CUX1-213ENST00000549414 ISL1P61371 349 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 TP53I3Q53FA7 332 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 HSD17B12Q53GQ0 312 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 ZNF619Q8N2I2 560 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 NEURL3Q96EH8 262 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 OR5M11Q96RB7 305 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 TBCCD1Q9NVR7 557 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 ZNF318Q5VUA4 2279 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 GPR75O95800 540 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 PRKCAP17252 672 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 CTXN1P60606 82 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 ABHD17CQ6PCB6 329 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 TMEM151BQ8IW70 566 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 CCL4L1Q8NHW4 92 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 BPIFA2Q96DR5 249 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 COQ10AQ96MF6 247 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 OR52D1Q9H346 318 aa15.27■□□□□ 0.03
CUX1-213ENST00000549414 MRPL15Q9P015 296 aaKnown RBP15.27■□□□□ 0.03
CUX1-213ENST00000549414 MBD1Q9UIS9 605 aaPredicted RBP15.27■□□□□ 0.03
CUX1-213ENST00000549414 HYKKA2RU49 373 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 C17orf105B2RV13 164 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 LCMT2O60294 686 aaKnown RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 TBCEQ15813 527 aaPredicted RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 LEG1Q6P5S2 330 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 HRASLS5Q96KN8 279 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 MYADMQ96S97 322 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 ALG8Q9BVK2 526 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 NFKBIL1Q9UBC1 381 aaPredicted RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 EIF3KQ9UBQ5 218 aaKnown RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 IER3IP1Q9Y5U9 82 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms