RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RCAN2Q14206 197 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 HSP90B2PQ58FF3 399 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 NHSL2Q5HYW2 709 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 BHLHB9Q6PI77 547 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 BLOC1S3Q6QNY0 202 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 MSANTD1Q6ZTZ1 278 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 NCCRP1Q6ZVX7 275 aaPredicted RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 YRDCQ86U90 279 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 MARVELD2Q8N4S9 558 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 FAM83FQ8NEG4 500 aaPredicted RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 OR2M3Q8NG83 312 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 DUSP19Q8WTR2 217 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 JADE3Q92613 823 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 GTF2H4Q92759 462 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 CCDC120Q96HB5 630 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 ZNF317Q96PQ6 595 aaPredicted RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 ZBTB18Q99592 522 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 NPHS2Q9NP85 383 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 PNPLA3Q9NST1 481 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 B4GALT7Q9UBV7 327 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 KCNE5Q9UJ90 142 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 DCTN4Q9UJW0 460 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 MEMO1Q9Y316 297 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 MRPS18CQ9Y3D5 142 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 ARHGAP21Q5T5U3 1957 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 E9PLN8 166 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 PRRG2O14669 202 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 ZG16O60844 167 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 ANGPTL1O95841 491 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 KRT16P08779 473 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 ZCCHC18P0CG32 403 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 B3GALT5-AS1P59052 145 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 LRRC74AQ0VAA2 488 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 GTDC1Q4AE62 458 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 KLHL26Q53HC5 615 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 WIPI1Q5MNZ9 446 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 DCST2Q5T1A1 773 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.385e-6■■■■□ 22.8
TSPAN4-220ENST00000532375 VASNQ6EMK4 673 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 RTL6Q6ICC9 239 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 C3P1Q6ZMU1 363 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 OLIG3Q7RTU3 272 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 CD163Q86VB7 1156 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 RPRMLQ8N4K4 120 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 ZFP90Q8TF47 636 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 SLC35G5Q96KT7 338 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 PANX1Q96RD7 426 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 TIMP4Q99727 224 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 VKORC1Q9BQB6 163 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 SLC35A5Q9BS91 424 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 OR51I1Q9H343 314 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 DSN1Q9H410 356 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 UBQLN4Q9NRR5 601 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 FGFR1OP2Q9NVK5 253 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 TMEM45AQ9NWC5 275 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 SLC6A5Q9Y345 797 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 KIAA1549Q9HCM3 1950 aa12.67□□□□□ -0.38
TSPAN4-220ENST00000532375 NPIPA5A0A0B4J1W7 369 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 A0A1W2PQD3 144 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 DUXAA6NLW8 204 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 NPIPA7E9PJI5 369 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 HMGN4O00479 90 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 BCKDKO14874 412 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 FCMRO60667 390 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 TRAPPC6AO75865 159 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 TPOP07202 933 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 GUSBP08236 651 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 NPIPA8P0DM63 369 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 OR12D1P0DN82 309 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 BMP7P18075 431 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 CAPN3P20807 821 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 SRD5A2P31213 254 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 GFRA1P56159 465 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 IRX1P78414 480 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 C17orf67Q0P5P2 114 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 MAPK11Q15759 364 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 ARHGAP11BQ3KRB8 267 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 TIGD2Q4W5G0 525 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 COX20Q5RI15 118 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 DCST1Q5T197 706 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 SLC2A7Q6PXP3 512 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 ZNF621Q6ZSS3 439 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 MSRB3Q8IXL7 192 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 OR5M9Q8NGP3 310 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 RAB8BQ92930 207 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 SARAFQ96BY9 339 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 SIKE1Q9BRV8 207 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 G6PC3Q9BUM1 346 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 UGT2B28Q9BY64 529 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 PAIP1Q9H074 479 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 SAP130Q9H0E3 1048 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 LDAHQ9H6V9 325 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 MED11Q9P086 117 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 SLAMF8Q9P0V8 285 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms