RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PPP2CBP62714 309 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PPP2CAP67775 309 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PRR5P85299 388 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 EFNB1P98172 346 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 COX10Q12887 443 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF155Q12901 538 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 RUNX3Q13761 415 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 EXOSC7Q15024 291 aaKnown RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ZIC1Q15915 447 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 DUSP5Q16690 384 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 SNAP47Q5SQN1 464 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 IDNKQ5T6J7 187 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 WDR88Q6ZMY6 472 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 Q8N402 240 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 TMEM99Q8N816 258 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF784Q8NCA9 323 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR5T3Q8NGG3 340 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PINK1Q9BXM7 581 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 BTBD1Q9H0C5 482 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PPIL3Q9H2H8 161 aaKnown RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 USP36Q9P275 1121 aaKnown RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 THAP10Q9P2Z0 257 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ARHGEF17Q96PE2 2063 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 LOC105369274A0A096LPK9 316 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR2W5A6NFC9 320 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 E9PI62 339 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 GABRPO00591 440 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 SLC2A2P11168 524 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ACADMP11310 421 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 GCGRP47871 477 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR10A3P58181 314 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 TSPAN31Q12999 210 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 KRR1Q13601 381 aaKnown RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PUS10Q3MIT2 529 aaKnown RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF542PQ5EBM4 170 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 C3orf38Q5JPI3 329 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ENPP7Q6UWV6 458 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 QSOX2Q6ZRP7 698 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 VN1R4Q7Z5H5 301 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 NR2C2APQ86WQ0 139 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR4N4Q8N0Y3 316 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR10H4Q8NGA5 316 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR51L1Q8NGJ5 315 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR13C5Q8NGS8 318 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 OR51A7Q8NH64 312 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 RELTQ969Z4 430 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 SPATA5L1Q9BVQ7 753 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 WSB2Q9NYS7 404 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 TAS2R7Q9NYW3 318 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 H2AFY2Q9P0M6 372 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PTGFRNQ9P2B2 879 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 ACSL5Q9ULC5 683 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 LIPT1Q9Y234 373 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 TRAPPC4Q9Y296 219 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 PCDHGB2Q9Y5G2 931 aa6.96□□□□□ -1.3
C11orf54-207ENST00000528288 NUP210Q8TEM1 1887 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-207ENST00000528288 TRAV27A0A087WT01 109 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 IQCMA0A1B0GVH7 501 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 C12orf71A8MTZ7 269 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 SURF4O15260 269 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 TBX19O60806 448 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 IL1AP01583 271 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 CHRNB1P11230 501 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 POLR2CP19387 275 aaPredicted RBP6.95□□□□□ -1.3
C11orf54-207ENST00000528288 CPN2P22792 545 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 GDI1P31150 447 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 SLC3A1Q07837 685 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ST3GAL3Q11203 375 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 RAB40BQ12829 278 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 MINDY4Q4G0A6 757 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 TRIQKQ629K1 86 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
C11orf54-207ENST00000528288 MRM1Q6IN84 353 aaKnown RBP6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ARL9Q6T311 187 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF836Q6ZNA1 936 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 OR2L8Q8NGY9 312 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 EFHD2Q96C19 240 aaPredicted RBP6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF681Q96N22 645 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ARHGAP9Q9BRR9 750 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 SLC17A9Q9BYT1 436 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 NDEL1Q9GZM8 345 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 SLC22A4Q9H015 551 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 BCL2L10Q9HD36 194 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 MAT2BQ9NZL9 334 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 GSTK1Q9Y2Q3 226 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 WDR45Q9Y484 360 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 A0A0B4J203 849 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 OR6C70A6NIJ9 312 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 FAM47E-STBD1D6RA91 191 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 GUCY1B2O75343 617 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 PAHP00439 452 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 MAKP20794 623 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ACVR1BP36896 505 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 RUNX2Q13950 521 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 C1orf53Q5VUE5 145 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 CDC73Q6P1J9 531 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 FRRS1Q6ZNA5 592 aa6.95□□□□□ -1.3
C11orf54-207ENST00000528288 ARL14Q8N4G2 192 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms