RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 CALHM2Q9HA72 323 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 SENP1Q9P0U3 644 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 CHMP2BQ9UQN3 213 aa3.61□□□□□ -1.83
PTPN12-214ENST00000520947 A0A1W2PNU3 283 aaPredicted RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 RAMP1O60894 148 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 PEX11AO75192 247 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 HMMRO75330 724 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 KRT6BP04259 564 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 CALCBP10092 127 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 PGAM2P15259 253 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 TNNI3P19429 210 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 FASP25445 335 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ACAA2P42765 397 aaKnown RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 KRT6CP48668 564 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 EMDP50402 254 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 NAPAP54920 295 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 CXCL6P80162 114 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 DCAF4L1Q3SXM0 396 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ZNF57Q68EA5 555 aaPredicted RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 CGB2Q6NT52 195 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 CBLN3Q6UW01 205 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 STAC2Q6ZMT1 411 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 GRAMD2AQ8IUY3 354 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ZBED8Q8IZ13 594 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ZNF540Q8NDQ6 660 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ADAMTS16Q8TE57 1224 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 TFB1MQ8WVM0 346 aaKnown RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 PPP1R16AQ96I34 528 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 THUMPD2Q9BTF0 503 aaKnown RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 ZNF416Q9BWM5 594 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 NFKBIZQ9BYH8 718 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 OPN3Q9H1Y3 402 aaPredicted RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 EXOSC3Q9NQT5 275 aaKnown RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 SLC35D1Q9NTN3 355 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 RDH8Q9NYR8 311 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 XPO7Q9UIA9 1087 aaKnown RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 EIF3LQ9Y262 564 aaKnown RBP3.6□□□□□ -1.83
PTPN12-214ENST00000520947 VSIG4Q9Y279 399 aa3.6□□□□□ -1.83
PTPN12-214ENST00000520947 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 FAM74A7A6NL05 159 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 DUX1O43812 170 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 CHRNA1P02708 482 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 DUX4L4P0CJ87 422 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 KLK2P20151 261 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 PTBP1P26599 531 aaKnown RBP eCLIP3.59□□□□□ -1.83
PTPN12-214ENST00000520947 PRPHP41219 470 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 FNTAP49354 379 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 NOVA1P51513 510 aaKnown RBP3.59□□□□□ -1.83
PTPN12-214ENST00000520947 OSTNP61366 133 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 CAMK4Q16566 473 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 FAM74A3Q4VXF1 159 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 TMEM41BQ5BJD5 291 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 MEDAGQ5VYS4 303 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 LRRC8BQ6P9F7 803 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 CENPUQ71F23 418 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 HSD11B1LQ7Z5J1 315 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 CENPLQ8N0S6 344 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-214ENST00000520947 BPIFB2Q8N4F0 458 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 CD177Q8N6Q3 437 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 OR5AU1Q8NGC0 362 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 C18orf25Q96B23 403 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-214ENST00000520947 TRIM44Q96DX7 344 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-214ENST00000520947 GSDMCQ9BYG8 508 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 RHOJQ9H4E5 214 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 WDR76Q9H967 626 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 POLD4Q9HCU8 107 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 MIEF1Q9NQG6 463 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 TBK1Q9UHD2 729 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 RNF6Q9Y252 685 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 KIF3AQ9Y496 699 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 IKBKGQ9Y6K9 419 aa3.59□□□□□ -1.83
PTPN12-214ENST00000520947 USP6P35125 1406 aa3.59□□□□□ -1.84
PTPN12-214ENST00000520947 CFAP65Q6ZU64 1925 aaKnown RBP3.58□□□□□ -1.84
PTPN12-214ENST00000520947 GPAA1O43292 621 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 NOL4O94818 638 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 ANP32DO95626 131 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 ADSSP30520 456 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 CDH5P33151 784 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-214ENST00000520947 SLC25A1P53007 311 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 NUCB2P80303 420 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 TGIF1Q15583 401 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 CHI3L2Q15782 390 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 CYP51A1Q16850 503 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 RIPPLY2Q5TAB7 128 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 MARC1Q5VT66 337 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 LANCL3Q6ZV70 420 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 FADS6Q8N9I5 356 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 GMCL1P1Q8NEA9 526 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 FBXO30Q8TB52 745 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 N4BP2L2Q92802 583 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-214ENST00000520947 C4orf36Q96KX1 117 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 NT5C3AQ9H0P0 336 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 POLR3FQ9H1D9 316 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-214ENST00000520947 DHX33Q9H6R0 707 aaKnown RBP3.58□□□□□ -1.84
PTPN12-214ENST00000520947 COG4Q9H9E3 785 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 CGNQ9P2M7 1197 aaKnown RBP3.58□□□□□ -1.84
PTPN12-214ENST00000520947 GALPQ9UBC7 116 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 GMPPBQ9Y5P6 360 aa3.58□□□□□ -1.84
PTPN12-214ENST00000520947 SYNJ2BP-COX16A0A087WUM0 186 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms