RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 TAMM41Q96BW9 452 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 DGCR14Q96DF8 476 aaKnown RBP7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 OTUB1Q96FW1 271 aaPredicted RBP7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 SLC35A4Q96G79 324 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 MS4A4EQ96PG1 132 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 OR7D2Q96RA2 312 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 ACTRT3Q9BYD9 372 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 AKIRIN1Q9H9L7 192 aaPredicted RBP7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 MKKSQ9NPJ1 570 aaPredicted RBP7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 DDX18Q9NVP1 670 aaKnown RBP7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 CTSFQ9UBX1 484 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 CNOT11Q9UKZ1 510 aaKnown RBP7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 RAB26Q9ULW5 256 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 PCDHGA1Q9Y5H4 931 aa7.29□□□□□ -1.24
CTHRC1-203ENST00000520337 ZFHX2Q9C0A1 2572 aaPredicted RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PTPRZ1P23471 2315 aaPredicted RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 EML6Q6ZMW3 1958 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 DOCK10Q96BY6 2186 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 AHCTF1Q8WYP5 2266 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 TCRBV16S1A1N1A0A5B0 115 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 ZC3H12DA2A288 527 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PMS2P1A4D2B8 440 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 VSTM2BA6NLU5 285 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PROB1E7EW31 1015 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 TMX2-CTNND1H3BSU7 103 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 M0QX08 132 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 ASNA1O43681 348 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 OR10H2O60403 315 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CNOT3O75175 753 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CSO75390 466 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 TIPRLO75663 272 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PGM3O95394 542 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CLPSP04118 112 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CHRM4P08173 479 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 ACP2P11117 423 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PSMA4P25789 261 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 AQP1P29972 269 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 RPL5P46777 297 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 LIMS1P48059 325 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 EMDP50402 254 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CHN2P52757 468 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 FOXL2P58012 376 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 DCDP81605 110 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 TXNL4AP83876 142 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 FUT7Q11130 342 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 TRIP6Q15654 476 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SYPL1Q16563 259 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 DUSP5Q16690 384 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CNPY1Q3B7I2 92 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CYBRD1Q53TN4 286 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 OGFRL1Q5TC84 451 aaPredicted RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 FOXB2Q5VYV0 432 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CDC73Q6P1J9 531 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 ZCCHC12Q6PEW1 402 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 EIF3MQ7L2H7 374 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 OLIG3Q7RTU3 272 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 OVCH1Q7RTY7 1134 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SZRD1Q7Z422 152 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SLC30A8Q8IWU4 369 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 MARVELD2Q8N4S9 558 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 ZNF615Q8N8J6 731 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SLC16A11Q8NCK7 471 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 FBXO30Q8TB52 745 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 STT3BQ8TCJ2 826 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PTPMT1Q8WUK0 201 aaPredicted RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 XAGE5Q8WWM1 108 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 LRTOMTQ8WZ04 291 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 POP5Q969H6 163 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CLIP3Q96DZ5 547 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 RBM18Q96H35 190 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 TMEM19Q96HH6 336 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 PYURFQ96I23 114 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 LRFN5Q96NI6 719 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 DGAT2Q96PD7 388 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SEPHS2Q99611 448 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CMKLR1Q99788 373 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 CHID1Q9BWS9 393 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 UGT2B28Q9BY64 529 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SLC7A5P2Q9GIP4 190 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 VN1R1Q9GZP7 353 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 MAGIXQ9H6Y5 334 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 BCL2L10Q9HD36 194 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 EQTNQ9NQ60 294 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 AGPAT4Q9NRZ5 378 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 THUMPD1Q9NXG2 353 aaKnown RBP7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 GIN1Q9NXP7 522 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 SLC39A1Q9NY26 324 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 AURKCQ9UQB9 309 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 V9GYQ6 96 aa7.28□□□□□ -1.24
CTHRC1-203ENST00000520337 GVINP1Q7Z2Y8 2422 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 HNRNPRO43390 633 aaKnown RBP7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 SLC28A2O43868 658 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 MFN2O95140 757 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 DDAH2O95865 285 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 MT-CO3P00414 261 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 MT-ND1P03886 318 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 BCHEP06276 602 aa7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 UBTFL6P0CB48 400 aaPredicted RBP7.27□□□□□ -1.25
CTHRC1-203ENST00000520337 RAP2AP10114 183 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms